Te-yuan Chyou (@davidchyou)
github

davidchyou

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    12
  • Global Rank 871,719 (Top 31 %)
  • Followers 3
  • Registered almost 6 years ago
  • Most used languages
    Perl
         40.0 %
    C
         20.0 %
    R
         20.0 %
    Shell
         20.0 %
  • Location πŸ‡³πŸ‡Ώ New Zealand
  • Country Total Rank 3,082
  • Country Ranking
    Perl
         59
    R
         158
    C
         302
    Shell
         599

Top repositories

1

CRISPRDetect_2.4

Updated version of CRISPRDetect.
3
star
2

TracrPredictor

This application finds tracrRNA genes in a genome with previously annotated CDS. Reference: Chyou D. T. and Brown C. M. (2018): Prediction and diversity of tracrRNAs from type II CRISPR-Cas systems. RNA Biology.
2
star
3

PredictTerm

A machine-learning based tool to predict intrinsic and Rho-dependent transcription terminators.
C
2
star
4

CRISPR_Array_Reformat

Convert CRISPR arrays predicted by commonly used applications to CRISPRDetect-GFF format.
Perl
1
star
5

CRISPRTarget_express

A simple script that computes essential data of CRISPR spacer targets in genomes, that the web application CRISPRTarget generates.
Shell
1
star
6

CRISPRHost

Predict viral hosts by BLASTN sequence alignment using CRISPR spacers.
Perl
1
star
7

CRISPR_ACR_ABR

Presence of CRISPR-Cas systems, anti-CRISPR genes and antibiotic resistance genes in RefSeq bacterial genomes, including R scripts for testing the associations between them.
R
1
star