David A. Parry (@david-a-parry)
github

david-a-parry

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    35
  • Global Rank 438,984 (Top 16 %)
  • Followers 8
  • Registered almost 14 years ago
  • Most used languages
    Perl
         45.5 %
    Python
         27.3 %
    C++
         9.1 %
    Java
         9.1 %
    HTML
         9.1 %
  • Location πŸ‡¬πŸ‡§ United Kingdom
  • Country Total Rank 16,688
  • Country Ranking
    Perl
         198
    HTML
         2,139
    C++
         3,359
    Java
         4,460
    Python
         6,758

Top repositories

1

autoprimer3

A program to automatically generate primer designs to genes and genomic coordinates using primer3
HTML
7
star
2

vase

Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.
Python
6
star
3

vcfhacks

simple to use commandline programs for VCF filtering and manipulation
Perl
5
star
4

cnvnatorWrapper

Simple wrapper script for running cnvnator automatically on multiple bam files.
C++
4
star
5

CrossMap

Fork of CrossMap (http://crossmap.sourceforge.net/) with some input/output niceties
Python
3
star
6

MutationMapper

Predict functional consequences of mutations identified from sanger sequencing.
Java
3
star
7

cnv-seq-wrapper

Wrapper scripts for CNV-seq
Perl
3
star
8

eddie_genomestrip_wrapper

Scripts and instructions for getting GenomeSTRiP to run on EDDIE3 at UoE
Perl
1
star
9

index_bam_by_read_id

python module for sorting, indexing and retrieving reads from BAMs using read IDs
Python
1
star
10

scoreSpliceSites

Perl
1
star
11

columnSelector

Outputs named columns from a text file on the commandline
Perl
1
star