Danny Antaki (@dantaki)
github

dantaki

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  • Stars
    star
    769
  • Global Rank 39,339 (Top 2 %)
  • Followers 38
  • Following 29
  • Registered almost 11 years ago
  • Most used languages
    Python
         40.0 %
    Jupyter Notebook
         20.0 %
    Perl
         15.0 %
    C++
         15.0 %
    Shell
         5.0 %
    R
         5.0 %

Top repositories

1

vapeplot

matplotlib extension for vaporwave aesthetics
Python
578
star
2

DeepBake

Baking Machine Learning into Great British Bake Off
Jupyter Notebook
71
star
3

SV2

Support Vector Structural Variation Genotyper
Python
58
star
4

CNVplot

Plot CNV data with a genome viewer in R
R
15
star
5

mMBA

Micro MBA Course
9
star
6

videos

supplementary files for tutorial videos
Shell
6
star
7

gtCNV

Genotype Copy Nuber Variation with Machine Learning.
4
star
8

Marcus-Aurelius-Bot

Tweeting Meditations to World Leaders
Python
4
star
9

fastq2fasta

Convert FASTQ to FASTA with C++
C++
3
star
10

svmerge

Merge SVs according to reciprocal overlap
Perl
2
star
11

SVanGogh

Pixelate SVs!
Python
2
star
12

snakemake_tutorial

Notes on Snakemake
Python
2
star
13

Local-De-Novo-Assembly-with-Long-Reads

A quick tutorial on local de novo assembly of long reads
2
star
14

chromCov

Calculate Chromosome Coverage with C++
C++
1
star
15

tensorflow_tutorial

Tutorials for TensorFlow
Jupyter Notebook
1
star
16

presentations

1
star
17

pyfreq

Cython optimized allele frequency calculation for VCFs
Python
1
star
18

pipeline

Get your pipe on
1
star
19

somatic_sim

Pipeline for simulating somatic variants with Pysim
Perl
1
star
20

stogie

Validate SVs with CIGAR Strings
C++
1
star
21

infractus

Validate deletions, tandem duplications, and inversions with single-reads
Perl
1
star
22

cookbook

Recipes for Computational Biology
Jupyter Notebook
1
star
23

pyslurm

construct SLURM job submission scripts
Python
1
star
24

pydnm

python clone of ForestDNM
Python
1
star
25

COVID19-Notebooks

Jupyter Notebooks of COVID19 Data
Jupyter Notebook
1
star
26

plink_tut

Plink Crash Course
1
star