Clint Valentine (@clintval)
github

clintval

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  • Stars
    star
    172
  • Global Rank 138,596 (Top 5 %)
  • Followers 136
  • Following 393
  • Registered over 11 years ago
  • Most used languages
    Python
         42.9 %
    Scala
         23.8 %
    Shell
         14.3 %
    Makefile     4.8 %
    Ruby
         4.8 %
    Rust
         4.8 %
    HTML
         4.8 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 31,200
  • Country Ranking
    Scala
         692
    Makefile     2,803
    Rust
         5,767
    Shell
         8,737
    Python
         9,480

Top repositories

1

sample-sheet

A permissively licensed library designed to replace Illumina's Experiment Manager
Python
45
star
2

cvbio

Artisanal 🀣 bioinformatics tools and pipelines in Scala
Scala
18
star
3

genome-browser

A lightweight Python graphing API for genomic features
Python
15
star
4

seattle-food-truck

Python app for the glorious food trucks in Seattle 🌭
Python
8
star
5

nucleic

Analysis and plotting library for base substitution spectra and signatures
Python
7
star
6

snakescale

Non-strict wrappers for the data pipelining language Snakemake
Python
6
star
7

gimme

Provisioning stack for EC2 instances powered by Vagrant and Ansible (unmaintained, difficult to use on new MacOS)
Shell
5
star
8

vartovcf

Convert variants from VarDict/VarDictJava into VCF v4.2 format.
Rust
4
star
9

comp-bio-conferences

Intl. Computational Biology & Bioinformatics conferences on the CLI
Python
4
star
10

neodisambiguate

Disambiguate reads that were mapped to multiple references
Scala
3
star
11

.dotfiles

My dashboard
Shell
2
star
12

krakenplot

πŸ¦‘ Visualize phylogenetic trees from the taxonomic sequence classifier Kraken
Python
2
star
13

mpl-helpers

Matplotlib wrappers for those hard-to-remember figure tweaks.
Python
2
star
14

aur-packages

Packages I maintain on the Arch User Repository (AUR)
Shell
2
star
15

clintval.github.io

Ruby
2
star
16

biodrawing

Small sketches of common ideas with a biology or bioinformatics theme.
Makefile
1
star
17

iterato

Safe and completely lazy parallel iteration in Scala
Scala
1
star
18

pendant

Python 3.6+ library for submitting to AWS Batch interactively
Python
1
star
19

interval

A better genomic interval that is compatible with HTSJDK
Scala
1
star
20

coursework

HTML
1
star
21

bimap

A modern bidirectional map in Scala
Scala
1
star