AndrΓ© Pedersen (@andreped)
github

andreped

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Top repositories

1

NoCodeSeg

πŸ”¬ Code-free deep segmentation for computational pathology
Jupyter Notebook
49
star
2

livermask

πŸ’₯ Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model
Python
44
star
3

GradientAccumulator

🎯 Accumulated Gradients for TensorFlow 2
Python
28
star
4

fast-stain-normalization

🌟 GPU-accelerated stain normalization command line tool
Python
14
star
5

super-ml-pets

🐒 AI for Super Auto Pets
Python
11
star
6

DMDetect

Code relevant for training, evaluating, assessing, and deploying CNNs for image classification and segmentation of Digital Mammography images
Jupyter Notebook
9
star
7

adverse-events

IEEE BIBM 2021: Bayesian optimization-guided topic modeling for automatic detection of sepsis-related events from free text
Python
7
star
8

PLS-Net

Reimplementation of the PLS-Net architecture used for lung lobe segmentation in CT
Python
7
star
9

DSS

πŸ“³ From training and deployment of ViTs to development of real-time cross-platform mobile apps!
Dart
7
star
10

IronFlow

πŸ“³ IronFlow: Cross-platform mobile app for strength training progress tracking
Dart
7
star
11

FP-DSA-plugin

Digital Slide Archive plugin to enable FAST deployment of pretrained CNNs for digital pathology
Python
5
star
12

neukit

πŸ€— neukit: web application for automatic brain extraction and preoperative tumor segmentation from MRI
Python
3
star
13

vsi2tif

Simple method for converting the CellSens .vsi format to a pyramidal .tif
Python
3
star
14

t-loss-tf

Robust T-Loss for Medical Image Segmentation with TensorFlow backend
Python
3
star
15

qupath-project-fixer

Simple program that makes it possible to directly run other people's qupath projects, without the need to re-importing all images again.
2
star
16

wsi-visualization-demo

Simple whole slide image rendering in the browser
HTML
2
star
17

chatbot-streamlit-demo

Develop accessible ChatBot with Azure OpenAI and Streamlit
Python
2
star
18

vit-explainer

πŸ”₯ Demonstrating Explainable AI with Vision Transformer in web app
Python
2
star
19

ReferenceBot

KnowledgeGPT + Azure OpenAI = <3
Python
2
star
20

MelanomAI

melanoma detection using mobile app
Dart
2
star
21

herai

Web service for testing AI-based models on your own data
Jinja
1
star
22

DeepMIL

Python
1
star
23

andreped

My personal repository
1
star
24

NLP-MTL

Example code for training neural networks to solve multiple tasks from free text, using multi-task learning and natural language processing.
Python
1
star
25

qpdata-fixer

Simple program which converts the qpdata-names, such that if they are accessible in QuPath-0.1.2, if they were produced in a newer version
HTML
1
star
26

ohif4hf

πŸ€— Showcasing AI solutions for medical applications in OHIF using Hugging Face
Dockerfile
1
star
27

INF1600-ai-workshop

πŸ”₯ Workshop in AI Deployment (INF-1600, UiT)
Python
1
star