Alexandre Almeida (@alexmsalmeida)
github

alexmsalmeida

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  • Stars
    star
    8
  • Global Rank 1,101,295 (Top 39 %)
  • Followers 16
  • Registered almost 9 years ago
  • Most used languages
    Python
         60.0 %
    Shell
         20.0 %
    R
         20.0 %
  • Location 🇬🇧 United Kingdom
  • Country Total Rank 33,884
  • Country Ranking
    R
         1,595
    Python
         4,418
    Shell
         5,521

Top repositories

1

virsearch

Snakemake workflow to detect and classify viruses in metagenome assemblies.
Python
9
star
2

magscreen

Snakemake workflow to screen a set of genomes (e.g., MAGs) against an existing genome database and identify novel species
Python
7
star
3

metamap

Snakemake workflow to map and quantify microbial genomes in metagenomic reads
Python
6
star
4

amr-profiler

Snakemake workflow to characterize the presence and abundance of antibiotic resistance genes in metagenomic datasets.
Shell
1
star
5

latinbiota

Central repository with scripts and workflows for the analysis of the gut microbiome of the Latinbiota cohort
R
1
star