@adamewing
github

adamewing

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  • Stars
    star
    451
  • Global Rank 63,238 (Top 3 %)
  • Followers 84
  • Following 8
  • Registered about 13 years ago
  • Most used languages
    Python
         91.7 %
    Shell
         8.3 %
  • Location 🇦🇺 Australia
  • Country Total Rank 1,306
  • Country Ranking
    Python
         145
    Shell
         1,707

Top repositories

1

bamsurgeon

tools for adding mutations to existing .bam files, used for testing mutation callers
Python
230
star
2

methylartist

Tools for plotting methylation data in various ways
Python
124
star
3

tldr

Identify and annotate TE-mediated insertions in long-read sequence data
Python
40
star
4

tebreak

Find and characterise transposable element insertions
Python
21
star
5

VCFcomparator

Tool for comparing mutation calls in VCF format
Python
12
star
6

te-nanopore-tools

tools for plotting and parsing methylation aimed at TEs
Python
7
star
7

GRIPper

Find non-reference processed pseudogene insertions from discordant read pair mappings
Python
5
star
8

discord-retro

Find non-reference TE insertions from discordant read pair mappings
Python
3
star
9

GRIPper2

Detect gene retrocopy insertion polymorphisms (GRIPs) from short-read paired-end WGS data
Python
2
star
10

nanorama

Real-time overview of nanopore targeted sequencing
Python
2
star
11

methylartist-tests

Test data and examples for methylartist
Shell
2
star
12

l1seq

Python
2
star