Xiaotao Wang (@XiaoTaoWang)
github

XiaoTaoWang

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    347
  • Global Rank 78,749 (Top 3 %)
  • Followers 197
  • Following 74
  • Registered about 10 years ago
  • Most used languages
    Python
         92.3 %
    Jupyter Notebook
         7.7 %
  • Location 🇨🇳 China
  • Country Total Rank 11,338
  • Country Ranking
    Python
         2,154
    Jupyter Notebook
         3,715

Top repositories

1

HiCLift

A fast and efficient tool for converting chromatin interaction data between genome assemblies
Python
59
star
2

NeoLoopFinder

A computation framework for genome-wide detection of enhancer-hijacking events from chromatin interaction data in re-arranged genomes
Python
51
star
3

EagleC

A deep-learning framework for predicting a full range of structural variations from bulk and single-cell contact maps
50
star
4

HiC_pipeline

An easy-to-use Hi-C data processing software supporting distributed computation.
Python
48
star
5

HiCPeaks

A Python implementation for BH-FDR and HiCCUPS
Python
39
star
6

TADLib

A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
Python
39
star
7

StripeCaller

A toolkit for analyzing architectural stripes
Python
16
star
8

domaincaller

A Python implementation of the original DI domain caller
Python
13
star
9

Best-Labs-of-3D-Genome

Data and the co-authored network I extracted for lab selection in 3D genome research field
Python
13
star
10

Project-Euler

Python solutions for Project Euler
Python
6
star
11

calTADs

A hierarchical domain caller for Hi-C data based on a modified version of Directionality Index
Python
5
star
12

Think-Complexity-Notes

Jupyter notebooks I created during reading Allen Downey's book Think Complexity
Jupyter Notebook
3
star
13

GradeSudoku

Python library for generating Sudoku puzzles of different grades
Python
1
star
14

JustForFun

Little scripts written on a whim
Python
1
star