Discover @ThomasDOtto Open Source projects

@ThomasDOtto

ThomasDOtto

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Location 🇬🇧 United Kingdom
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ILRA

Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs, correct homopolymer tracks and circulate plastids. We also have the code preinstalled on a virtual linux machine.

ratt

Rapid Annotation Transfer Tool

varDB

Script how to assemble var genes in Plasmodium falciparum

QISeq

A bioinformatical pipeline to process Quantitative Insertion-site Sequencing (QIseq) samples

IPA

Script to improve long read (pacbio) assemblies