Kasper Skytte Andersen (@KasperSkytte)
github

KasperSkytte

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  • Stars
    star
    123
  • Global Rank 177,794 (Top 7 %)
  • Followers 47
  • Following 35
  • Registered almost 8 years ago
  • Most used languages
    Shell
         40.0 %
    R
         30.0 %
    Python
         10.0 %
    HTML
         10.0 %
    Dockerfile
         10.0 %
  • Location 🇩🇰 Denmark
  • Country Total Rank 817
  • Country Ranking
    R
         16
    Shell
         64
    Dockerfile
         111
    HTML
         437
    Python
         1,567

Top repositories

1

ampvis2

Tools for visualising microbial community amplicon data
R
67
star
2

AutoTax

Generate de novo taxonomy of full length 16S rRNA sequences directly from environmental samples
Shell
19
star
3

mmgenome2

Tools for extracting individual genomes from metagenomes
R
17
star
4

BASH_template

A simple BASH template script
Shell
5
star
5

ASV_pipeline

Bioinformatic pipeline for processing 16S rRNA amplicon data with exact Amplicon Sequence Variants (ASV's)
Shell
3
star
6

bioscripts

Miscellaneous bioinformatic helper scripts for various tasks
Shell
3
star
7

Amplicon-visualiser

A shiny app to visualise amplicon data, based on ampvis2
R
3
star
8

MasterThesis

My master thesis in Biotechnology as written with bookdown to integrate interactive plots. A PDF version is also available. CLICK THE LINK TO VIEW
HTML
2
star
9

MC-prediction

Predicting Activated Sludge Microbial Communities based on time series of continuous sludge samples by using graph neural networks
Python
2
star
10

docker-pigz

Minimal Alpine linux image with pigz for multithreaded gzip
Dockerfile
1
star
11

madsalbertsen-ampvis2

1
star