Jean-Philippe Fortin (@Jfortin1)
github

Jfortin1

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  • Stars
    star
    534
  • Global Rank 54,217 (Top 2 %)
  • Followers 116
  • Following 83
  • Registered about 12 years ago
  • Most used languages
    R
         75.0 %
    Python
         8.3 %
    HTML
         8.3 %
    C++
         4.2 %
    TeX
         4.2 %
  • Location 🇺🇸 United States
  • Country Total Rank 15,958
  • Country Ranking
    R
         147
    HTML
         4,247
    TeX
         5,690
    Python
         7,924

Top repositories

1

ComBatHarmonization

Harmonization of multi-site imaging data with ComBat
R
248
star
2

neuroCombat

Harmonization of multi-site imaging data with ComBat (Python)
Python
112
star
3

MNITemplate

MNI152 Template
R
34
star
4

RAVEL

Intensity normalization of structural MRIs using RAVEL
HTML
26
star
5

neuroCombat_Rpackage

neuroCombat R package
R
18
star
6

TCGA_AB_Compartments

A/B compartments for 12 cancer types estimated from TCGA methylation data
R
18
star
7

HiC_AB_Compartments

12
star
8

EveTemplate

JHU-MNI-ss (Eve) Template
R
11
star
9

funnorm_repro

Funnorm reproducible analysis
R
10
star
10

shinyMethyl

Interactive visualization of Illumina methylation array data
R
4
star
11

scATAC_Compartments

A/B compartments from single-cell ATAC seq (scATAC)
R
4
star
12

crisprScore

On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Python
3
star
13

tcgaR

TCGA R Portal
R
2
star
14

Jipito

Personal R package
R
2
star
15

Statistics_for_genomics

Lab material for Statistics for Genomics class
HTML
2
star
16

neuroCombatData

Example dataset for neuroCombat in R
R
2
star
17

compartments_repro

Reproducible analysis of the compartments paper
R
2
star
18

HiC_AB_Compartments_Mouse

R
1
star
19

crisprScoreData

Pre-trained models for the crisprScore package
R
1
star
20

bioc2015methylation

Bioconductor tutorial for 450k methylation arrays
1
star
21

crisprDesignData

R
1
star
22

arbalist

Migrating ArchR's core functionality to Bioconductor
C++
1
star
23

crisprBase

Base functions and classes for CRISPR gRNA design
R
1
star
24

crisprDesign

Core functions for CRISPR design
R
1
star
25

crisprBowtie

Bowtie-based alignment of CRISPR gRNA spacer sequences
R
1
star
26

crisprDesignPaper

Manuscript and analyses for crisprDesign manuscript
TeX
1
star