Discover @IdoBar Open Source projects

Ido Bar (@IdoBar)

IdoBar

Stars
21
Global Rank 618,230 (Top 22 %)
Followers 20
Following 2
Registered almost 9 years ago
Most used languages

R
30.8 %

HTML
23.1 %

TeX
15.4 %

Python
15.4 %

Shell
7.7 %

Jupyter Notebook
7.7 %
Location 🇦🇺 Australia
Country Total Rank 8,914
Country Ranking

TeX
169

R
366

HTML
936

Shell
1,142

Jupyter Notebook
1,347

Python
4,691

par-spanner

A shell wrapper to split an input large FASTA file and then execute NCBI BLAST or HMMscan in parallel

Crop_Production

Crop production data for Australian Chickpea and tropical fruits (Papaya, Strawberry, Pineapple and Mango)

Pathogen_diagnostics_analysis

Pathogen Diagnostics using Nanopore MinIon

Sajitha_qPCR_primer_design

Design qPCR primers for Sajitha Biju, UniMelb

3030NSC_Workshop6_DGE

Applied Bioinformatics (3030NSC) Workshop6 - Differential Gene Expression Analysis

Peel_get_NCBI_records

Improved retrieval of records from NCBI using rentrez

A_rabiei_DArT

Analysis of A. rabiei DArT-Seq data (genotyping by sequencing)

rmdTemplate

Bioinformatics Pipeline Documentation Template

CNVpytor_binder

Binder repo to analyse CNVpytor results

Jupyter Notebook

Mazospega

MAke ZOtero SPEcies Great Again

SSR_pRimer_design

Filter SSR sites and design primers with Primer3 in R

A_rabiei_WGS_analysis

Whole-Genome-Sequencing analysis pipeline of Ascochyta rabiei isolates

FastRetriever

A python script used to extract specific sequences from a fasta file based on ID or keyword