Emma Hobbs (@HobnobMancer)
github

HobnobMancer

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Top repositories

1

cazy_webscraper

Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.
Python
12
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2

cazomevolve

`cazomevolve` ('cazome-evolve') investigates the evolution of CAZomes, and identifies CAZy families that co-occur within the genomes of candidate species, more frequently than would be expected by lineage.
Jupyter Notebook
4
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3

pyrewton

Python package for the identification of comprehensive CAZyomes of candidate species
HTML
3
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4

SI_Foltanyi_et_al_2023

Bioinformatics work for the paper Foltanyi et al., 2022
HTML
2
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5

SI_Hobbs_et_al_2023_Pecto_Dickeya

Supplementary information on the exploration of the CAZome and carbohydrate processing enzyme activities in soft rot Pectobacteriaceae
Jupyter Notebook
1
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6

SI_CE_PL_exploration

Explore the sequence, structure and function of CAZymes containing a CE and PL9 domain.
Shell
1
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7

sipbs-compbio-python-workshop-2022

Materials for the SIPBS CompBio workshop
Jupyter Notebook
1
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8

saintBioutils

Repository of utility and miscellaneous functions for using in bioinformatics pipelines, primarily in Python
Python
1
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9

SI_Hobbs_et_al_2023_cazywebscraper

Supplementary information for analyses reported in Hobbs et al. (2023), for presenting the software package `cazy_webscraper`
Shell
1
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10

SI_Hobbs_et_al_2024_Pecto

Supplementary information for analyses reported in Hobbs et al. (2024), describing the evolution of the CAZome
HTML
1
star