Discover @FrederickHuangLin Open Source projects

Huang (Frederick) Lin (@FrederickHuangLin)

FrederickHuangLin

Stars
205
Global Rank 120,909 (Top 5 %)
Followers 78
Following 4
Registered over 10 years ago
Most used languages

HTML
77.8 %

R
22.2 %
Location 🇺🇸 United States
Country Total Rank 29,649
Country Ranking

R
309

HTML
3,093

ANCOMBC

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

ANCOM-Code-Archive

Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM function.

ANCOM-BC-Code-Archive

Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC function.

Microbiome-Review-Code-Archive

Data, scripts, and outputs for the npj Biofilms and Microbiomes paper "Analysis of microbial compositions: A review of normalization and differential abundance analysis"

SECOM-Code-Archive

Archive: Data, scripts, and outputs for the paper "Sparse Estimation of Correlations among Microbiomes (SECOM)". Please check our ANCOMBC R package for the most up-to-date SECOM functions.

Gut-Microbiome-and-HIV-Infection

Scripts and outputs for the paper "Signature changes in gut microbiome are associated with increased susceptibility to HIV-1 infection in MSM"

ANCOM-BC2-Code-Archive

Archive: Data, scripts, and outputs for the paper "Multi-group Analysis of Compositions of Microbiomes with Covariate Adjustments and Repeated Measures". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC function.

Gut-Microbiome-and-Sexual-Behavior

Scripts and outputs for the paper "High risk sexual behavior is linked to changes in gut microbiome and systemic inflammation that lead to HIV-1 infection in men who have sex with men"

Gut-Microbiome-and-Metabolic-Syndrome

The archive for data, scripts, and outputs for the paper "Bacterial and Immunological Mediators linking Caregiving with Metabolic Syndrome".