@ChristophKirst
github

ChristophKirst

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Top repositories

1

ClearMap2

ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap
Jupyter Notebook
103
star
2

ClearMap

ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
Python
49
star
3

SimKernel

SimKernel controls parameter scans and iterations for any given C++ code
C++
14
star
4

CElegansBehaviour

Analysis tools for long term C. Elegans Behaviour
Python
8
star
5

StemCellTracker

Tool to Segment and Track Stem Cells in 3D
MATLAB
6
star
6

TemplateCreator

C++ to Heka Patchmaster Interface and GUI for self-designed stimuli and online analysis
C++
4
star
7

CMMFile

Exchange binary files between C++, Mathematica and Matlab
C++
4
star
8

ForceLearning

FORCE learning implementation
Python
2
star
9

ClearMap2Documentation

ClearMap 2.0 Documentation
JavaScript
2
star
10

KateMathematica

Mathematica Syntax Highlighting for Kate
1
star
11

RepoTracker

Tracks activity on github repositories
Python
1
star
12

SpikeDecoding

Project for brain state sensitive spike decoding
Python
1
star
13

Test

Tests
Jupyter Notebook
1
star
14

ClearMapUnstable

ClearMap's repository for most recent unstable version, use stable ClearMap repository
Python
1
star
15

CelegansLongTermBehavioralAnalysis

Scripts to analyse the long term behavior of C.Elegans
Python
1
star