Discover @BjornFJohansson Open Source projects

Björn Johansson (@BjornFJohansson)

BjornFJohansson

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215
Global Rank 116,444 (Top 5 %)
Followers 54
Following 75
Registered about 10 years ago
Most used languages

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30.8 %

Python
30.8 %

HTML
30.8 %

JavaScript
7.7 %
Location 🇵🇹 Portugal
Country Total Rank 480
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HTML
113

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330

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3,085

pydna

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Jupyter Notebook

seguid_calculator

A gui for calculating seguid checksums for biological sequences

obsidian_git_experiment

google-python-exercises

Python 3 version of the google-python-exercises

pygenome

Pygenome provide Python access to the Saccharomyces cerevisiae genome.

pydna-examples

https://github.com/MetabolicEngineeringGroupCBMA/pydna-examples

pydnaweb

Online PCR simulator, Tm calculator and primer designer and more!

cobrapy_exercises

Notebooks showing basic use of cobrapy

Jupyter Notebook

ypkpathway

Automatic pathway assembly with the YeastPathwayKit

dnaudit

DNAUDIT is a software tool that verifies cloning strategies expressed as text files using a very light markup. This format is identical to the one produced by some of the Pydnaweb tools.

Jupyter Notebook

tm

Comparison of methods to calculate melting temperature for oligonucleotides

biopython-scripts

An-Hour-of-Python

⌛ An hour of introduction to Python. Using the Anaconda Python distribution and the Spyder editor.

AutoSlideProcessor

Convert files in a Github repository using TravisCI (for example Libreoffice Impress 🢂 PDF) and push resulting files to a Dropbox folder

Jupyter Notebook