Andrea Guarracino (@AndreaGuarracino)
github

AndreaGuarracino

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  • Stars
    star
    85
  • Global Rank 233,631 (Top 9 %)
  • Followers 107
  • Registered over 4 years ago
  • Most used languages
    Rust
         44.4 %
    Jupyter Notebook
         22.2 %
    C
         11.1 %
    R
         11.1 %
    Python
         11.1 %

Top repositories

1

paf2chain

convert PAF format to CHAIN format
Rust
24
star
2

chain2paf

convert CHAIN format to PAF format
Rust
12
star
3

WFPOA

An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs
C
9
star
4

DataStructuresForBioinformatics

Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata
Jupyter Notebook
9
star
5

1000G-ONT-F100-PGGB

PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium
R
8
star
6

pafgnostic

Rust
5
star
7

rs-spodgi

Line-by-line converter from GFA to RDF (turtle)
Rust
3
star
8

ReferenceGraphPangenomeDataAnalysisHackathon2023

Material for the Reference Graph Pangenome Data Analysis Hackathon 2023, November 13-17 in Cape Town, South Africa
3
star
9

HG002_assemblies_assessment

Pangenomic assessment of HG002 assemblies
Jupyter Notebook
2
star
10

maftools

Python
1
star