• Stars
    star
    2
  • Language
    Python
  • License
    BSD 3-Clause "New...
  • Created over 5 years ago
  • Updated over 5 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Cookiecutter template for a Python package

More Repositories

1

antibody-dl

A Collection of Platform, Tools, and Resources for Antibody Engineering
Python
9
star
2

choppy-pipe

An integrated analysis platform for efficiently achieving computational reproducibility
Python
8
star
3

chat-publications

Ask questions and get answers from publications
Python
7
star
4

biomedgps

A knowledge graph system with graph neural network for drug discovery, disease mechanism and biomarker screening.
Rust
6
star
5

fs.ossfs

AliCloud OSS filesystem for PyFilesystem2
Python
6
star
6

minio-clj

Clojure Wrapper around Minio-java client
Clojure
4
star
7

biomedgps-data

Biomedical knowledge graph & graph neural network models for drug repurposing.
Jupyter Notebook
3
star
8

ossutil-github-action

GitHub actions for aliyun ossutil.
Shell
3
star
9

rcore-tutorial-v3

rCore-Tutorial-v3开发环境
Dockerfile
3
star
10

clj-filesystem

An unified sdk for several object storage system.
Clojure
2
star
11

ask-chatgpt

Get answers from chatgpt by using selenium.
Python
2
star
12

text2knowledge

Extract entities and relationships from biomedical text and build a knowledge graph.
Jupyter Notebook
2
star
13

preqc-pack

To generate the required pre-evaluation indicators at one time...
Rust
2
star
14

ossutil-github-action-js

A JavaScript action for ossutil.
JavaScript
1
star
15

biopoem

Biopoem for DAG Task with Large-scale Servers.
Rust
1
star
16

omics-tools

A suite of programs for interacting with high-throughput sequencing data.
Rust
1
star
17

oss-clj

Clojure Wrapper around oss-java client
Clojure
1
star
18

cgdspy

Python based API for accessing the Cancer Genomics Data Server (CGDS).
Python
1
star
19

cgdsclj

Clojure based API for accessing the Cancer Genomics Data Server (CGDS).
Clojure
1
star
20

cluster-deployer

Cluster Deployer for deploying HPC cluster.
Shell
1
star
21

datascience-stacks

Dockerfile
1
star
22

cluster-utils

The Choppy Cluster Utilities are the basic file, shell and text manipulation utilities of the GNU operating system and HPC Cluster. These are the cluster utilities which are expected to exist on every operating system or HPC Cluster.
Python
1
star
23

metadata-tool

For Metadata QC & QA.
Clojure
1
star
24

rapex

RAPEX - Response to Air Pollution EXposure
Clojure
1
star
25

remote-fs

File system utilities for object store in clojure.
Clojure
1
star
26

cljs-template

A project template for ClojureScript & Tauri.
Clojure
1
star
27

ontology-matcher

It's a simple ontology matcher for building a set of cleaned ontologies. [For BioMedGPS project]
Python
1
star
28

local-fs

File system utilities in clojure.
Clojure
1
star
29

biodata-validator

A set of specs for biomedical metadata
Clojure
1
star
30

coql

A Clojure library designed to turn query json into SQL.
Clojure
1
star
31

bioinformatics-algorithms

Rosalind | Problems
Rust
1
star
32

biomedgps-studio

[Frontend] A knowledge graph system with graph neural network for drug discovery, disease mechanism and biomarker screening.
TypeScript
1
star
33

yjcyxky

1
star
34

data-model-viewer

A viewer for data dictionary based on Windmill.
JavaScript
1
star
35

notify-api

Notify someone with something by email, dingtalk etc.
Clojure
1
star
36

biomedical-knowledgebases

A collection of biomedical knowledgebases, ontologies, and datasets.
1
star
37

biominer-indexd

Index Engine for Omics Data Files.
TypeScript
1
star
38

gliomarker

GlioMarker is the first diagnostic biomarker database in the field of gliomas to provide biomarker knowledge exploration, including comprehensive literature mining, ontology annotations, precision medical knowledge exploration, and omics data online analysis.
PLpgSQL
1
star
39

prophet-studio

A labeling tool for building your own domain knowledgebase from biomedical publications. Let us read the papers routinely and build our own domain knowledgebase together.
Python
1
star
40

knowledge-graph-editor

This extension is designed for synchronizing findings/knowledges into a biomedgps instance. The findings/knowledges are annotated from literature and other sources using Label Studio.
JavaScript
1
star
41

tservice-core

A plugin system for managing several types of plugins, such as deploying http/async/dag task.
Clojure
1
star