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POETs.jl
POETs implementation in the Julia programming languageBSTModelKit.jl
A Julia package for building, and running Biochemical Systems Theory (BST) modelsCHEME-4800-5800-Examples-Labs-Fall-2024
Repository for examples for the CHEME 4/5800 course at Cornell for Fall 2024CHEME-5660-CourseRepository-Fall-2024
Course repository for CHEME 5660 at Cornell for the Fall 2024 semesterCHEME-1800-4800-Course-Repository-S23
Repository for the CHEME-1800-4800 computing course at Cornell UniversityCHEME-5660-Markets-Mayhem-Example-Notebooks
CHEME-5660-Markets-Mayhem-Book
Book for CHEME 5660 Markets, Mayhem for Scientists and EngineersVLQuantitativeFinancePackage.jl
Package holding routines and types for CHEME 5660 at CornellDOPS_Manuscript_Repository
Repository for the DOPS manuscriptCHEME-1800-Computing-Book
Repository for the CHEME 1800 course notesChE525-Codes
Code for the lecture examples shown in ChE 525Prostate_model_code_repository
Model code repository for the second generation prostate modelCHEME-5440-7770-Cornell-Spring-2022
Repository for CHEME 5440 and 7770 lectures, examples, problem sets, codes, etc.Publication_DOPS_MATLAB_code_repository
Repository for the DOPS algorithm implemented in the MATLAB programming languageENGRI-1120-Cornell-Varner
Repository for ENGRI 1120 examples and problemsCHEME-3130-F2020
Thermodynamics.jl
Repository for CHEME 3130 codesENGRI-1120-IntroToChemE-Example-Notebooks
Notebooks for the examples of ENGRI-1120 Introduction to Chemical Engineering at Cornell UniversityCHEME-5660-Course-Repository-F23
Course repository for CHEME 5660 Fall 2023 at Cornell UniversityKwatee-NFBA-Plugin
Plugin for the generation of nonlinear flux balance models in the Julia programming languageSBMLToVFFParser
Utility to convert SBML files to VFF formatENGRI-1120-IntroToChemE-Book
Repository for the ENGRI 1120 BookMinerva
Natural language compiler and biochemical model code generator in the Julia programming languageCHEME-3130-F2017-Varner
GitHub repository for CHEME-3130 notes and code for F2017ChE525-Lecture-Notes-S16
Lecture notes for ChE 525 S16 semester Purdue UniversityRecon-2.2-Model
Model repository for the Recon-2.2 modelcell_free_dynamic_fba_manuscript
Cell free dynamic flux balance analysis manuscriptJuHCM-Generator
Hybrid cybernetic model code generator written in the Julia programming languageHCM-FBA-Model-Code
Repository for the hybrid cybernetic modeling with flux balance analysis or HCM-FBA paperKinetic-CFPS-Model-Publication-Code
Repo for the kinetic cell free model codeSEML
SEML: A Simplified English Modeling Language for Constructing Biological Models in JuliaCHEME-5660-Examples-F23
Repository holding example notebooks and codes from CHEME 5660 Fall 2023CHEME-5660-Labs-F23
Lab repository for CHEME 5660 for the Fall 2023 semesterGapFindFill.jl
Repository for a GapFill algorithm written in JuliaBST-S-Sytem-Model-Coagulation
Biochemical systems theory model of the extrinsic and intrinsic coagulation cascadeSequence-Specific-FBA-CFPS-Publication-Code
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