vandijklab/HBEC_SARS-CoV-2_scRNA-seq

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vandijklab/HBEC_SARS-CoV-2_scRNA-seq

vandijklab

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Supplementary data for "Single-cell longitudinal analysis of SARS-CoV-2 infection in human bronchial epithelial cells"

cell2sentence-ft

Cell2Sentence turns scRNA-seq data into text for LLM training.

BrainLM

Jupyter Notebook

CINEMA-OT

Jupyter Notebook

CST

Continuous Spatiotemporal Transformer

scGAT

Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attention Networks" to appear in ACM Proceedings. <https://arxiv.org/abs/2002.07128>

cell2sentence

Cell2Sentence: Teaching Large Language Models the Language of Biology

Jupyter Notebook

single-cell_neurodegeneration

Code for Tejwani L* & Ravindra NG* et al. 2020

Jupyter Notebook