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jupyter_notebook_beginner_guide
A brief guide to install and run Jupyter/IPython notebookspycorrelate
Fast and accurate cross-correlation over arbitrary time lags. Moved to:PyBroMo
A simulator for single molecule FRET experiments of freely diffusing particles. Moved to:FRETBursts
Burst analysis software for smFRET. **Moved to OpenSMFS organization**pybroom
pybroom, the python's broom to tidy up messy fit results!nlp_text_generation
Experiments generating text with state-of-the-art deep-learning models (GPT2, Transformer XL, ...)notebooks
Some IPython Notebooksparquet-pyarrow-pyconit-2022
euroscipy2018_python_optimization
EuroScipy 2018 Tutorial "A tour of python profiling and optimization"euroscipy2018_jupyter_reproducibility
Slides on reproducible Jupyter-based workflow.Jupyter-Python-Workshop-STROBE-2018-02-26
Material for Hands-on Python Workshop, STROBE 2018-02-26lcos_multispot_pattern
Create a multispot pattern via phase LCOS-SLM. Repository moved to:48-pixel-SPAD-crosstalk-analysis
Optical crosstalk in SPAD arrays for high-throughput smFRETpandas_notes
Notes on using pandas (merge, joins, pivot, stack, string ops, etc...)48-spot-smFRET-PAX-analysis
Data analysis for the 48-spot smFRET-PAX paper48spot-PAX-manuscript
ml-notes
Machine Learning Notesmultispot_paper
Data analysis for Ingargiola et al. PLOS ONE (2017) doi:10.1101/085027transfer_convert
FRETBursts_notebooks
Tutorials and usage examples for FRETBursts softwarereproducible_papers
A curated list of computationally reproducible papers.polimi_tcspc_16ch
Data analysis for Ingargiola et al. Proc.SPIE 100710Qvoltagesensing
Data analysis of the voltage-sensing patch-clamp experiment.Love Open Source and this site? Check out how you can help us