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fungaltraits
A dynamic database of fungal trait measurementsdatastorr
Simple data versioning and distributionplant
Trait-Driven Models of Ecology and Evolution 🌲rrqueue
R + Redis queuesdockertest
Run tests in docker containerstaxonlookup
A versioned and dynamically updating taxonomic lookup table for land plantsaustraits
R package for accessing the AusTraits Plant databaseaustraits.build
Source for AusTraitsgrowthform
Versioned database that includes growth form information for the world's land plants, currently >140,000 speciesdata_versioning
An approach for practical and simple data versioning in Rphyndr
Match tip and trait datatraits.build
Source for the traits.build R package, used to build AusTraitsmodeladequacy
The purpose of this project is to develop an approach to evaluate the fit of continuous trait evolution models and to apply this approach to angiosperm functional trait data.standViz
Make 3D plots of individual trees and stands using openGLbaad.data
Access data in baadmortality_bci
Tropical tree mortality model using Barro Colorado Island as a case studyexperimentr
rootplant_paper
Paper about planttraitfill
Generalises the approach in https://github.com/richfitz/woodversioned_data_template
This is the minimum set of tools to set up and distribute a versioned dataset via an R packagelitterfitter
Package for fitting and testing alternative models for single cohort litter decomposition datasizedist
phyndr-ms
Manuscript and figures for phyndr paperAPCalign
R package for accessing, matching and updating species names of Australian floragrowth_trajectories
Code for reproducing http://doi.org/10.1101/083451APD
The Australian Plant Traits Dictionarymulti_trait_succession
Code for reproducing the figures in http://doi.org/10.1073/pnas.1610206114, http://doi.org/10.1101/014605, http://doi.org/10.1111/j.1365-2745.2010.01735.xcallr
Simple interface for calling Raustraits_ms
Paper about the austraits databasetraitecoevo.github.io
Menu of various R tools and datasets for trait-based ecology and evolutiontraits.build-book
traits-build manualinfinitylists
infinitylists allows you to generate place-based species lists for anywhere in Australia, pulling collection data and iNaturalist records from the Atlas of Living Australia.stateliner
Code and documentation for connecting stateline and Raustraits-python
bmsma
Bayesian Multilevel Standardised Major Axis modelsaustraits-api
ksi
Finding Distinctive Clades with the Komogorov-Smirnov Importance Statisticsmatr
an R package for estimation and inference about allometric linescompetition_kernels
🌱 Emergent shapes of trait-based competition functions from resource-based models 🌳🌲🌴hmde
Implementation of hierarchical Bayesian longitudinal models to estimate differential equation parameters.Revolve
Adaptive Dynamics toolkit for Rcolors_in_citizen_science
Data and code that investigate the reliability of color data extracted from citizen science photographsplant_talk
Slides for talk about plant package, for BES webinar on March 1 2016remake_baad_example
Example remake workflow using BAADtree_rings
richness
stan_crossval_demo
Example workflow to efficiently run k-fold cross validation using stanplant.assembly
Assembly code for plantmortality_models
reproductive_allocation_kuringgai
Code reproducing papers by Lizzy Wenk on reproductive allocation of plant species In Kuringai National Parkdrat
Drat repository for our packagestraits.build-template
An example repository to get you startedausinvertraits.build
Source for Australian Invertebrate Traits DatabaseLove Open Source and this site? Check out how you can help us