tobiasrausch/svcatalog

Stars
2
Language
License
GNU General Publi...
Created about 9 years ago
Updated over 8 years ago

tobiasrausch/svcatalog

tobiasrausch

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Human Genetic Structural Variants

alfred

BAM Statistics, Feature Counting and Annotation

wally

Wally: Visualization of aligned sequencing reads and contigs

ATACseq

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

vc

A tutorial on structural variant calling for short read sequencing data

lorax

A long-read analysis toolbox for cancer and population genomics

nRex

nRex: Germline and somatic single-nucleotide, short indel and structural variant calling

tenX

rayas

Templated insertion discovery

covid19

SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing

rdxon

Reference-free FASTQ filter for rare germline and somatic variants

repliseq

Repli-Seq analysis pipeline

RNAseq

RNA-Seq processing pipeline

lamp

LAMP testing (Covid screening)

allis

Allele-specific expression

vcfaid

VCFaid: Genotype likelihood based GQ estimation

ml2

Machine Learning

coral

Coral: COpy-numbeR ALterations

circosplots

Scripts to generate circos plots

workflows

Common Workflow Language

sv

Structural variant calling tutorial using long-reads.

dbg

phaseBam

Phase a BAM file using a phased SNP scaffold

exercise1

t-all

tobiasrausch.github.io

Homepage of Tobias Rausch

indexingtests

pods

Kubernetes (K8s) stuff