Discover timsainb/neuroethology_paper_2021 Open Source project

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timsainb

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for 2021 current opinions paper

noisereduce

Noise reduction in python using spectral gating (speech, bioacoustics, audio, time-domain signals)

Jupyter Notebook

1,447

tensorflow2-generative-models

Implementations of a number of generative models in Tensorflow 2. GAN, VAE, Seq2Seq, VAEGAN, GAIA, Spectrogram Inversion. Everything is self contained in a jupyter notebook for easy export to colab.

Jupyter Notebook

996

Tensorflow-MultiGPU-VAE-GAN

A single jupyter notebook multi gpu VAE-GAN example with latent space algebra and receptive field visualizations.

Jupyter Notebook

441

python_spectrograms_and_inversion

Spectrograms, MFCCs, and Inversion Demo in a jupyter notebook

Jupyter Notebook

164

ParametricUMAP_paper

Parametric UMAP embeddings for representation and semisupervised learning. From the paper "Parametric UMAP: learning embeddings with deep neural networks for representation and semi-supervised learning" (Sainburg, McInnes, Gentner, 2020).

Jupyter Notebook

149

GAIA

Generative Adversarial Interpolative Autoencoder (GAIA) is a Generative Adversarial Network (GAN) made up of Autoencoders (AE) trained explicitly on interpolations to promote convexity and better latent interpolations.

Jupyter Notebook

AVGN

A generative network for animal vocalizations. For dimensionality reduction, sequencing, clustering, corpus-building, and generating novel 'stimulus spaces'. All with notebook examples using freely available datasets.

Jupyter Notebook

avgn_paper

Latent and generative models of animal vocalizations for songbirds, mice, primates, humans, cetaceans, etc.

Jupyter Notebook

tensorflow-2-feature-visualization-notebooks

Feature and class visualization with deep neural networks in tensorflow. Contains deepdream, style transfer, receptive field visualization, convolutional filter visualization, etc.

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vocalization-segmentation

Simple python algorithms for segmenting animal (songbird, mice) vocalizations into notes and syllables using Dynamic Thresholding and Continuity Filtering.

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birdbrain

A library for viewing songbird brain atlases (European starling, Canary, Zebra finch, Pigeon, Mustached bat)

Jupyter Notebook

curriculum_vitae

My Curriculum Vitae, generated in Python via Jinja from JSON fields into HTML. http://timsainburg.com/pages/cv.html

HTML

postdoc_salaries

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automutualinformation

Auto Mutual Information (Sequential Mutual Information) for temporal data.

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ParallelsBirdsongLanguagePaper

Code for the Paper "Parallels in the sequential organization of birdsong and human speech." Nature Communications (2019)

Jupyter Notebook

graph_research_notes

Graphing my grad school research notes using networkx and sigma.js

Jupyter Notebook

kinectacq

Acquisition from a Kinect rig

Jupyter Notebook

visualize_wordpress_posts

Visualizing Wordpress Posts using D3 forced directed networks

HTML

multicamera_acquisition

Synchronized machine vision acquisition across multiple cameras using an arduino (Supports FLIR and Basler)

Jupyter Notebook

LeabraExample

LongRangeSequentialOrgPaper

Jupyter Notebook

spikesorting-graph-examples

A quick example spikesorting graph to show the spikeinterface team

Jupyter Notebook

example_r_colab_project

Just a tiny example project for running your R code on colab

Jupyter Notebook

kinect_acquisition_template

Python

timsainb/neuroethology_paper_2021

timsainb

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