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  • Created over 4 years ago
  • Updated about 2 months ago

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Repository Details

Parsnip wrappers for survival models

censored a pixelated version of the parsnip logo with a black censoring bar

R-CMD-check Codecov test coverage Lifecycle: experimental

censored is a parsnip extension package which provides engines for various models for censored regression and survival analysis.

Installation

You can install the released version of censored from CRAN with:

install.packages("censored")

And the development version from GitHub with:

# install.packages("pak")
pak::pak("tidymodels/censored")

Available models, engines, and prediction types

censored provides engines for the models in the following table. For examples, please see Fitting and Predicting with censored.

The time to event can be predicted with type = "time", the survival probability with type = "survival", the linear predictor with type = "linear_pred", the quantiles of the event time distribution with type = "quantile", and the hazard with type = "hazard".

model engine time survival linear_pred raw quantile hazard
bag_tree rpart βœ” βœ” βœ– βœ– βœ– βœ–
boost_tree mboost βœ” βœ” βœ” βœ– βœ– βœ–
decision_tree rpart βœ” βœ” βœ– βœ– βœ– βœ–
decision_tree partykit βœ” βœ” βœ– βœ– βœ– βœ–
proportional_hazards survival βœ” βœ” βœ” βœ– βœ– βœ–
proportional_hazards glmnet βœ” βœ” βœ” βœ” βœ– βœ–
rand_forest partykit βœ” βœ” βœ– βœ– βœ– βœ–
rand_forest aorsf βœ– βœ” βœ– βœ– βœ– βœ–
survival_reg survival βœ” βœ” βœ” βœ– βœ” βœ”
survival_reg flexsurv βœ” βœ” βœ” βœ– βœ” βœ”
survival_reg flexsurvspline βœ” βœ” βœ” βœ– βœ” βœ”

Contributing

This project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

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