thanhleviet/ansible-slurm-climb

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Python
Created almost 7 years ago
Updated about 2 years ago

thanhleviet/ansible-slurm-climb

thanhleviet

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Ansible playbook for installing SLURM based cluster on CLIMB (Cloud Infrastructure for Microbial Bioinformatics)

ISfinder-sequences

Insertion sequences (Insertion Element) [https://en.wikipedia.org/wiki/Insertion_sequence] collected from ISfinder (https://isfinder.biotoul.fr/)

sci-hub

A simple extension for safari web browser to access papers

shiny-realtime-stock-chart

A prototype of real-time chart for stock trading. Made with shiny and highcharter

nf-pipelines

A mix of nextflow scripts mainly used for bacteria. Under developing.

nf-nanopore-assembly

Simple nextflow script to run de-novo assembly on nanopore data with Flye and polishing the assembly with medaka.

nf-pilon

A simple nextflow script to run iteratively pilon for polishing long read contigs with Illumina reads

docker-tensorflow-flask

Docker for implementing tensorflow based models as a webservice using Flask

wave_julia

Continuous Wavelet Transform in Julia based on Torrence and Compo (1998) http://paos.colorado.edu/research/wavelets/

Jupyter Notebook

nextflow-ratt

using RATT with nextflow and docker

tanglegram

Make tanglegram with R

monitor_github_release

Simple python script for monitoring software of interest for SARS-Covid19 sequencing pipelines at QIB

extract-table-from-docx-with-r

Trích xuất dữ liệu bảng biểu trong file Word (docx) và tạo báo cáo thống kê số liệu bằng R

make_prokka_db

A script for downloading complete sequences from genbank and make blast database for use with prokka