Discover thackl/pro-tycheposons Open Source project

Stars
5
Rank 2,861,937 (Top 57 %)
Language
R
License
Other
Created over 5 years ago
Updated 4 months ago

thackl

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Supplementary code and data for mobile genetic elements in Prochlorococcus

gggenomes

A grammar of graphics for comparative genomics

588

minidot

Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2

proovframe

frame-shift correction for long-read (meta)genomics

Perl

seq-scripts

scripts for sequence and feature conversion, annotation, analysis ...

Perl

treemmer-animate

detectEVE

Find endogenous viral elements in genomes

Python

cross-species-scaffolding

Super-scaffolding of draft genome assemblies with in silico mate-pair libraries derived from (closely) related references

Shell

ggworldmap

Visualize Global-Scale Quantitative Data on World Maps with Projection and Shifted Central Meridian

thacklr

A Collection of R Functions and Snippets I Often Use

host-phage-tRNA-att-finder

Link phages and potential host by finding shared attachment sites for prophage integration

Perl

kmer-scripts

scripts for working with kmers - plots, filter, ...

thackl.github.io

Source code of my homepage & blog

HTML

lecture-variant-calling

Variant-Calling-Example

proovframe-benchmark

Benchmark data sets used to assess proovframe - frame-shift correction for long-read (meta)genomics

Shell

plot-scripts

Quick plots directly in the terminal window

google-sync

Scripts for syncing local tsv files with google spreadsheets

dropbox-dual-account-setup

Multiple dropbox accounts on linux

Shell

simons-metagenome-data-descriptor-map-figure

Jupyter Notebook

thackl/pro-tycheposons

thackl

Reviews

Repository Details

More Repositories