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gggenomes
A grammar of graphics for comparative genomicsminidot
Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2proovframe
frame-shift correction for long-read (meta)genomicsseq-scripts
scripts for sequence and feature conversion, annotation, analysis ...treemmer-animate
detectEVE
Find endogenous viral elements in genomescross-species-scaffolding
Super-scaffolding of draft genome assemblies with in silico mate-pair libraries derived from (closely) related referencesggworldmap
Visualize Global-Scale Quantitative Data on World Maps with Projection and Shifted Central Meridianthacklr
A Collection of R Functions and Snippets I Often Usehost-phage-tRNA-att-finder
Link phages and potential host by finding shared attachment sites for prophage integrationpro-tycheposons
Supplementary code and data for mobile genetic elements in Prochlorococcuskmer-scripts
scripts for working with kmers - plots, filter, ...thackl.github.io
Source code of my homepage & bloglecture-variant-calling
Variant-Calling-Exampleproovframe-benchmark
Benchmark data sets used to assess proovframe - frame-shift correction for long-read (meta)genomicsplot-scripts
Quick plots directly in the terminal windowgoogle-sync
Scripts for syncing local tsv files with google spreadsheetssimons-metagenome-data-descriptor-map-figure
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