tdhock/PeakSegFPOP-paper

Stars
1
Language
TeX
Created over 8 years ago
Updated about 2 years ago

tdhock/PeakSegFPOP-paper

tdhock

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Functional pruning optimal partioning algorithm for PeakSeg constrained segmentation model

animint

animated and interactive web graphics

directlabels

Direct labels for multicolor plots in lattice or ggplot2

animint2

Animated interactive grammar of graphics

change-tutorial

Materials for the useR2017 tutorial on changepoint detection

WeightedROC

Fast, weighted ROC curves

mclapply-memory

Why does mclapply take so much memory?

penaltyLearning

Supervised machine learning for changepoint detection

nc

Named capture regular expressions for text parsing and data reshaping

interactive-tutorial

useR 2016 tutorial on "Understanding and creating interactive graphics"

ggplotly

cs499-spring2019

animint-paper

animint-book

Learn how to create animated interactive ggplots using the animint2 R package

PeakSegPipeline

Supervised machine learning pipeline for peak calling in ChIP-seq data

cs499-spring2020

regex-tutorial

Tutorial on named capture regular expressions in R and Python

namedCapture

An R package for named capture regular expressions

SegAnnDB

Segmentation and Annotation DataBase (interactive DNA copy number analysis using supervised machine learning)

when-c

mmit-paper

cs470-570-spring-2021

2023-08-artificial-intelligence

PeakSegOptimal

Constrained Optimal Segmentation

PeakSegJoint

Supervised segmentation for jointly finding peaks in several ChIP-seq samples

cs470-570-spring-2023

binsegRcpp

rankSVMcompare

Support vector machines for ranking and comparing

PeakError

2023-res-baz-az

2023 Research Bazaar Arizona, Intro to Deep Learning in R

2020-yiqi-summer-school

cs105-205-305-fall-2022

requireGitHub

record GitHub R package versions

cs499-599-fall-2021

PeakSegDisk

Disk-Based Constrained Optimal Segmentation For Peak Detection in Huge Genomic Data

aft-poster

Accelerated failure time models poster

neuroblastoma-data

bams

Breakpoint annotation model smoothing

2023-08-deep-learning

revector

Regular expression vectors

mlr3resampling

Resampling algorithms for mlr3 framework in R

atime

Asymptotic timing

montreal-velos

tutorials

List of tutorials

dotfiles

animint-examples

Big data sets to illustrate animint

binseg

cs599-fall2019

animint-tutorial

temperature-sensor

communauto-viz

Data visualization for communauto price comparison

RMTL2018

inlinedocs

Convert inline comments and examples to Rd documentation files

r-devel-emails

cs570-spring-2022

2023-10-LatinR-data.table

cs305exam_fall22

PeakSeg-paper

cs499-599-fall-2020

aum

works-poster

Reproducible research works_with_R

cs499-599-fall-2022

LOPART

peak-summits

tree-canopy

feature-learning-benchmark

datatable-foverlaps

benchmarking foverlaps

pepseq-paper

plotMakefile

min-aup-paper

changepoint-data-structure

max-generalized-auc

2023-08-unsupervised-learning

graphics-tutorial

iregnet-paper

JSS paper about iregnet R package

functional-pruning-theory

heartbeat

read heartbeat mp3 and viz peak model of amplitude

testthatQuantity

Record times for unit tests

slurm

R functions for running/parsing slurm commands

ecg-labels

memtime

Measure time and memory usage of R code

namedCapture-article

2024-08-data-bases

angular-change-paper

2024-08-29-screenshot-test

2024-09-16-K-fold-CV-train-sizes-regression

2024-09-15-K-fold-CV-train-sizes-regression

necromass