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metacell
Metacell - Single-cell mRNA Analysismetacells
Metacells - Single-cell RNA Sequencing Analysisembflow
schic2
tgstat
Fast and efficient statistical tools from the Tanay labMCView
A shiny app for metacell analysistglkmeans
Efficient Implementation of Kmeans++ Algorithmli_et_al_cell_2018_melanoma_scrna
tgutil
Tanay group collection of simple utility functionsmetabric_rrbs
shaman
The shaman package - sampling HiC contact matrices for a-parametric normalizationmisha
Genomic data analysis suitelabNorm
Normalize Laboratory Measurements by Age and Genderdaf
Data in Axes in FormatsEmbExe
EXE development paper analysis coderabembflow
IIAS2023
metacells-vignettes
Vignettes for the Python metacells packageMendelson_et_al_2023
scHiC_embryo
metacell.flow
Supporting inference of differentiation flow over metacell manifolds (and innovation of additional scRNA buzzwords)MARS-SEQ
MARS-SEQ pipeline (scrna module from tlsrc)slanter
Slanted Matrices and Ordered Clusteringrepsc
methylayer
Tumor Expression-Methylation Layerd AnalysisMeir_et_al_nat_gen_2020_clonemem
Luria-Delbruck design, comparing transcriptome, methylome and exome of single-cells to hundreds of single-cell-derived clonesmldpEHR
Markovian Lifelong Mortality and Disease Predisposition models for electronic health records.hematopoiesis2018
gpatterns
umi4cpackage
NestedTests.jl
Run tests in nested evironments.tet-gastrulation
TET gastrulation paper analysis codeDnmt3ab_MEEB
tgconfig
The goal of tgconfig is to provide infrastructure for managing package parameters, (inspired by https://github.com/r-lib/pkgconfig)repguide
tanaylab.github.io
tgppt
Tanay Group Powerpoint UtilsGmara
Genes Manifests Archive for RNA AnalysisBarboyBercovich
Pipeline and analysis of CD8+ Tcells timed response to immunotherapy in mouse modelsLove Open Source and this site? Check out how you can help us