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metacell
Metacell - Single-cell mRNA Analysismetacells
Metacells - Single-cell RNA Sequencing Analysisembflow
schic2
tgstat
Fast and efficient statistical tools from the Tanay labMCView
A shiny app for metacell analysistglkmeans
Efficient Implementation of Kmeans++ Algorithmli_et_al_cell_2018_melanoma_scrna
tgutil
Tanay group collection of simple utility functionsmetabric_rrbs
shaman
The shaman package - sampling HiC contact matrices for a-parametric normalizationmisha
Genomic data analysis suitelabNorm
Normalize Laboratory Measurements by Age and Genderdaf
Data in Axes in FormatsEmbExe
EXE development paper analysis coderabembflow
naryn
Native Access medical record Retriever for high Yield aNalyticsmetacells-vignettes
Vignettes for the Python metacells packageMendelson_et_al_2023
scHiC_embryo
metacell.flow
Supporting inference of differentiation flow over metacell manifolds (and innovation of additional scRNA buzzwords)MARS-SEQ
MARS-SEQ pipeline (scrna module from tlsrc)slanter
Slanted Matrices and Ordered Clusteringrepsc
methylayer
Tumor Expression-Methylation Layerd AnalysisMeir_et_al_nat_gen_2020_clonemem
Luria-Delbruck design, comparing transcriptome, methylome and exome of single-cells to hundreds of single-cell-derived clonesmldpEHR
Markovian Lifelong Mortality and Disease Predisposition models for electronic health records.hematopoiesis2018
gpatterns
umi4cpackage
NestedTests.jl
Run tests in nested evironments.tet-gastrulation
TET gastrulation paper analysis codeDnmt3ab_MEEB
tgconfig
The goal of tgconfig is to provide infrastructure for managing package parameters, (inspired by https://github.com/r-lib/pkgconfig)repguide
tanaylab.github.io
tgppt
Tanay Group Powerpoint UtilsGmara
Genes Manifests Archive for RNA AnalysisBarboyBercovich
Pipeline and analysis of CD8+ Tcells timed response to immunotherapy in mouse modelsLove Open Source and this site? Check out how you can help us