stschiff/msmc-tools

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Created over 9 years ago
Updated 11 months ago

stschiff/msmc-tools

stschiff

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Tools and Utilities for msmc and msmc2

msmc

Implementation of the multiple sequential markovian coalescent

msmc2

sequenceTools

GAworkshop

Genome Analysis Workshop (Jena 2016) material

compPopGenWorkshop2019_docs

Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.

Jupyter Notebook

haskell-cli-example

exp_dat_reading_group_2021

Public Repository of our Fall 2021 Reading group on PCA, STRUCTURE and other means of low-dimensional representation of genetic data

rarecoal

Implementation of the rare allele coalescent to infer population phylogenies

compvar-workshop-docs

Documentation for the 2018 Genome Analysis workshop I gave in Helsinki

Jupyter Notebook

rarecoal-tools

Tools for processing genome sequence data for rarecoal and other rare variant analyses.

sequence-formats

File Format specs for Rarecoal

hfit

mini-admixfrog

A minimal implementation of the Admixfrog model in R

Ancient_DNA_Workshop_Sept_2022

bibtex-hs