stan-dev/rstan

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Created over 11 years ago
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stan-dev/rstan

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RStan, the R interface to Stan

RStan

RStan is the R interface to Stan.

Quick links

mc-stan.org/rstan (online RStan documentation, vignettes)
Stan documentation (language manual, case studies, and more)
Ask a question (Stan Forums on Discourse)
Open an issue (GitHub issues for bug reports, feature requests)

Getting Started

For installation instructions and other tips on getting started with RStan see

RStan Getting Started

Several Stan users have also contributed translations of the RStan Getting Started page:

Source Repository

RStan's source code repository is hosted here on GitHub. Stan's source repository is defined as a submodule. See how to work with stan submodule in rstan repo.

Licensing

RStan is licensed under GPLv3. The Stan code packaged in RStan is licensed under new BSD.

stan

Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

pystan2

PyStan, the Python interface to Stan

example-models

Example models for Stan

math

The Stan Math Library is a C++ template library for automatic differentiation of any order using forward, reverse, and mixed modes. It includes a range of built-in functions for probabilistic modeling, linear algebra, and equation solving.

bayesplot

bayesplot R package for plotting Bayesian models

rstanarm

rstanarm R package for Bayesian applied regression modeling

pystan

PyStan, a Python interface to Stan, a platform for statistical modeling. Documentation: https://pystan.readthedocs.io

stancon_talks

Materials from Stan conferences

shinystan

shinystan R package and ShinyStan GUI

cmdstan

CmdStan, the command line interface to Stan

posteriordb

Database with posteriors of interest for Bayesian inference

posterior

The posterior R package

loo

loo R package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS)

cmdstanpy

CmdStanPy is a lightweight interface to Stan for Python users which provides the necessary objects and functions to compile a Stan program and fit the model to data using CmdStan.

cmdstanr

CmdStanR: the R interface to CmdStan

stanc3

The Stan transpiler (from Stan to C++ and beyond).

projpred

Projection predictive variable selection

stan-mode

Emacs mode for Stan.

rstantools

Tools for Developing R Packages Interfacing with Stan

docs

Documentation for the Stan language and CmdStan

httpstan

HTTP interface to Stan, a package for Bayesian inference.

design-docs

MathematicaStan

A Mathematica package to interact with CmdStan

connect22-space-time

StanCon Connect 2022 space and time

stancon2023

Materials for StanCon 2023

Jupyter Notebook

statastan

Stata interface for Stan.

nomad

gmo

Inference on marginal distributions using gradient-based optimization

posteriordb-python

stat_comp_benchmarks

Benchmark Models for Evaluating Algorithm Accuracy

posteriordb-r

pystan-wheels

Automated builds of OSX and manylinux wheels for pystan

performance-tests-cmdstan

Performance testing tools for use with CmdStan

perf-math

logos

r-packages

Repository for distributing (some) stan-dev R packages

httpstan-wheels

Wheels for httpstan

visual-diagnostics

Visual diagnostics for HMC using gnuplot.

sgb

Stan Governing Body issue tracker and meeting notes

atom-language-stan

stan2tfp

Stan2TFP is a work-in-progress alternative backend for Stanc3 which targets TensorFlow Probability

.github

Stan organization READMEs and information

jenkins-shared-libraries

Libraries for our Jenkinsfiles

stan-discourse-theme-component

propaganda

Sell sheets and the like

ci-scripts

Formerly syclik's stan-scripts repo. Contains scripts used by Jenkins as well as the release scripts and performance scripts.