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tape
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.gpn
Genomic Pre-trained Networktape-neurips2019
Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (DEPRECATED)factored-attention
This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of Simplified Attentionmogwai
rna-sieve
A library for the deconvolution of bulk cell samples using single-cell RNA expression data.CPT
Cross-protein transfer learning for variant effect predictionscquint
swga2
CherryML
Scalable Maximum Likelihood Estimation of Phylogenetic Modelsscquint-analysis
MultiCluster
Software for three-way clustering of multi-tissue multi-individual gene expression data using semi-nonnegative tensor decompositioncontact-geometry
MOCHIS
One- and two-sample tests against general families of alternativesHiDENSEC
Code for Tracing cancer evolution and heterogeneity using Hi-Cslc22a5
Variant effect prediction for SLC22A5 transporter gene using Potts modelsEGGTART
Extensive GUI gives TASEP realization in real-time.Love Open Source and this site? Check out how you can help us