shenwei356/pinyin shenwei356/pinyin

  • Stars
    star
    8
  • Rank 2,099,232 (Top 42 %)
  • Language
    Python
  • Created about 9 years ago
  • Updated about 9 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
shenwei356/pinyin
github

shenwei356

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

收集汉字，结合汉语拼音来取名

More Repositories

1

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
Go
1,066
star
2

csvtk

A cross-platform, efficient and practical CSV/TSV toolkit in Golang
Go
882
star
3

awesome

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
568
star
4

taxonkit

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies
Go
256
star
5

brename

A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression
Go
224
star
6

kmcp

Accurate metagenomic profiling && Fast large-scale sequence/genome searching
Go
139
star
7

LexicMap

LexicMap: efficient sequence alignment against millions of prokaryotic genomes
Go
96
star
8

bio_scripts

Practical, reusable scripts for bioinformatics
Perl
90
star
9

bio

A lightweight and high-performance bioinformatics package in Golang
Go
83
star
10

unikmer

Toolkit for k-mer with taxonomic information
Go
53
star
11

ClipboardTextJoiner

Monitoring system clipboard change and joining multi-line text. It's very useful when copying multi-line text from PDF files.
Perl
47
star
12

go4bio

Golang for Bioinformatics
31
star
13

gtdb-taxdump

GTDB taxonomy taxdump files with trackable TaxIds
R
28
star
14

easy_qsub

Easily submitting multiple PBS jobs or running local jobs in parallel. Multiple input files supported.
Python
27
star
15

countminsketch

An implementation of Count-Min Sketch in Golang
Go
24
star
16

taxid-changelog

NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.
R
19
star
17

bwt

Burrows-Wheeler Transform and FM-index in golang
Go
18
star
18

cnote

A platform independent command line note app
Go
17
star
19

gtaxon

gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API server for both local and remote server.
Go
15
star
20

easy_sbatch

easy_sbatch - Batch submitting Slurm jobs with script templates
Python
14
star
21

ncbi_acc2gtdb_acc

Mapping NCBI Genbank accession to GTDB accession
14
star
22

strobemers

A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)
Go
14
star
23

ictv-taxdump

NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)
12
star
24

crun

Run workflow mixed with concurrent and sequential jobs. Please use https://github.com/shenwei356/rush
Go
10
star
25

breader

breader (Buffered File Reader), asynchronous parsing and pre-processing while reading file. Safe cancellation is also supported.
Go
9
star
26

lexichash

LexicHash in Golang
Go
8
star
27

pand

Bitwise AND on two byte-slices using SIMD instructions
Go
7
star
28

unik

A k-mer serialization package for Golang
Go
7
star
29

kmers

bit-packed k-mers methods for Golang
Go
7
star
30

install-windows

Windows系统安装经验
6
star
31

perfect-bioinformatic-tools

What should perfect bioinformatic tools be like?
6
star
32

breseq-rm-bg

Removing control/background mutations from breseq output index.html
Go
5
star
33

bbuffer

An alternative of standard library bytes.Buffer
Go
5
star
34

dirsize

Summarize size of directories and files in directories
Go
5
star
35

datakit

CSV/TSV file manipulation and more. Please use my another tool: csvtk, https://github.com/shenwei356/csvtk
Python
4
star
36

util

Golang utility packages
Go
4
star
37

uint64-hash-bench

Benchmark of three uint64 hash functions
Go
3
star
38

simhash-eval

Go
2
star
39

sun2021-cami-profiles

Ground truth metagenomic profiles in CAMI format for the 25 metagenomic reads in Sun et al.
2
star
40

go-hashing-kmer-bench

Benchmark of hashing k-mers in Golang
Go
2
star
41

shenwei356

2
star
42

RNA-HairpinFigure

Draw hairpin-like text figure from RNA sequence and its secondary structure in dot-bracket notation.
Perl
2
star
43

BioUtil

Bioinformatics Perl modules
Perl
2
star
44

rust-practice

Some tools in Rust for learning
2
star
45

todo

A very simple online todo list application
Go
1
star
46

blast-nf

A nextflow-based BLAST command-line helper tool
Nextflow
1
star
47

easy_run

Run command with default options in configuration file
Python
1
star
48

swr

Wei Shen' R utilities
R
1
star
49

shenwei356.github.io

HTML
1
star
50

uintset

Fast uint64 Set in golang
Go
1
star
51

process_queue

Process queue for high CPU/RAM/time usage processes
Perl
1
star
52

roux2016-mock-virome-cami-profile

Ground truth metagenomic profiles in CAMI format for the mock virome communities in Roux et al.
1
star