shaunchuah/cfdna_nextflow shaunchuah/cfdna_nextflow

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    star
    1
  • Language Nextflow
  • License
    MIT License
  • Created about 3 years ago
  • Updated over 2 years ago
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shaunchuah/cfdna_nextflow
github

shaunchuah

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Repository Details

Nextflow pipeline for cfDNA metagenomic analyses. Runs fastqc, bowtie2, samtools, kraken2. Cloud execution with azure batch.

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