sebastian-gregoricchio/snakeATAC

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Language
Python
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GNU General Publi...
Created about 3 years ago
Updated 4 months ago

sebastian-gregoricchio/snakeATAC

sebastian-gregoricchio

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Snakemake pipeline for analysis and normalization of ATAC-seq data starting from fastq.gz files.

snHiC

Snakemake pipeline for analysis and normalization of Hi-C data starting from fastq.gz files. It includes the possibility to perform grouped analyses, TAD, loops and stripes detections, as well as differential compartment and chromatin interaction analyses.