schatzlab/presentations schatzlab/presentations

  • Stars
    star
    7
  • Rank 2,294,772 (Top 46 %)
  • Language
    HTML
  • License
    MIT License
  • Created over 7 years ago
  • Updated over 1 year ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
schatzlab/presentations
github

schatzlab

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Presentations from the schatzlab - http://schatz-lab.org/presentations/

More Repositories

1

genomescope

Fast genome analysis from unassembled short reads
JavaScript
212
star
2

appliedgenomics2018

Materials for Spring 2018 Applied Genomics Course
Jupyter Notebook
71
star
3

appliedgenomics2017

JHU EN.600.649: Computational Genomics: Applied Comparative Genomics
HTML
54
star
4

appliedgenomics2021

Materials for Spring 2021 Applied Genomics Course
52
star
5

crossstitch

Code for phasing SVs with SNPs
Java
50
star
6

pseudohaploid

Create a pseudohaploid assembly from a partially resolved diploid assembly
Perl
30
star
7

appliedgenomics2023

Materials for EN.601.449/649 Computational Genomics: Applied Comparative Genomics
HTML
27
star
8

appliedgenomics2022

Materials for EN.601.449/EN.601.649 Computational Genomics: Applied Comparative Genomics
Jupyter Notebook
23
star
9

appliedgenomics2019

Materials for Spring 2019 Applied Genomics Course
21
star
10

t2t-variants

Papyrus
20
star
11

scikit-ribo

Accurate estimation and robust modelling of translation dynamics at codon resolution
Python
18
star
12

datastructures2018

Materials for JHU Data Structures 2018
Java
17
star
13

appliedgenomics2020

Description Materials for Spring 2020 Applied Genomics Course
Jupyter Notebook
16
star
14

biomedicalresearch2021

Course Materials for EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research
13
star
15

Col-CEN

Resources for the Col-CEN reference genome assemblies
10
star
16

t2t-chm13-chry

Jupyter Notebook
9
star
17

PodPlot

Plot coverage or percent of total sequence as a function of minimum read length
Python
5
star
18

teachingarchive

Archive of teaching materials
Jupyter Notebook
4
star
19

biomedicalresearch2017

EN.601.452 / AS.020.415 Computational Biomedical Research & Advanced Biomedical Research
Jupyter Notebook
3
star
20

LongTron

Shell
2
star
21

schatzlab.github.io

Source materials for schatzlab.github.io
HTML
2
star
22

anvil

1
star
23

asm_model

Statistical Modeling and Prediction of Genome Assembly Quality
Shell
1
star
24

scikit-ribo_manuscript

Reproducing the analysis in the scikit-ribo manuscript using iPython notebooks
Jupyter Notebook
1
star