sc-zhang/MATE sc-zhang/MATE

  • Stars
    star
    5
  • Rank 2,847,511 (Top 57 %)
  • Language
    Python
  • Created over 1 year ago
  • Updated 4 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
sc-zhang/MATE
github

sc-zhang

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

MATE (Meaningful Allelic-haploType dEtector) is a tool for identifying allelic haplotype associate with phenotypes.

More Repositories

1

bioplotz

A plot package for bioinformatics
Python
27
star
2

AlleleFinder

AlleleFinder is a tool for identifying allele genes from polyploid genome.
Python
21
star
3

bioscripts

several scripts for bioinformatics
Python
17
star
4

CATG

CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for assembly.
Python
13
star
5

ALLHiC_components

Some components that speed up and reduce resource cost for original ALLHiC
Python
12
star
6

T2Tools

T2Tools is a toolset contains several tools for T2T assembly, and it is under development.
Python
10
star
7

ALLHiC_adjuster

A toolset for adjusting ALLHiC assembly
Python
5
star
8

popCNV

popCNV is a tool for calculating copy number of genes and get genes selected by humans
Python
5
star
9

BarcodePHP

A PHP library for generating EAN 8/13 barcode
PHP
5
star
10

kPart

kPart is a kmer-based tool for partition contigs into groups with parents, previous name is TrioCC
Python
4
star
11

CUFscripts

Some scripts for visualizing Papaya SV
Python
4
star
12

ALLHiC_Evaluate_Data_Generators

Some scripts for generating simulate data for evaluating ALLHiC
Python
4
star
13

wbf2wbfs

A simple tool for converting Wii games from wbf format to wbfs, batch convert support.
Visual Basic .NET
4
star
14

PanPara

PanPara is a tool for identifying paralog genes with pan-genome.
Python
3
star
15

PanMarker

PanMarker is a tool for identifying variants associate with phenotypes from pan-genome.
Python
3
star
16

boring_codes

Coding when boring.
C++
2
star
17

SCLibrary

Simple C/C++ Libraries, for exercising
C
2
star
18

NGC_Wii_Game_ID

A simple tool for reading and writing game name and game id for Wii (wbfs/iso) and NGC(gcm/iso)
Visual Basic .NET
2
star
19

sc-zhang

2
star
20

KITE

C++
2
star
21

MHSPF

MHSPF(MicroHomologous Sequences Pairs Finder) is a simple tool for searching MHS pairs from genome
Python
2
star
22

Text2Folder

A simple tools which can create multi folders with a list file
Visual Basic 6.0
1
star
23

png2ico

The png2ico is a simple tool for converting png file to ico file or ico file to png file.
C#
1
star
24

pPart

Python
1
star