• Stars
    star
    1
  • Language
    PHP
  • License
    Creative Commons ...
  • Created over 11 years ago
  • Updated over 1 year ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Website for the IMP project

More Repositories

1

imp

The Integrative Modeling Platform
C++
73
star
2

cryptosite

Library for prediction of cryptic binding sites
Python
20
star
3

pmi

Python Modeling Interface
Python
12
star
4

rmf

The library to support reading and writing of RMF files.
C++
7
star
5

metamodeling

MATLAB
5
star
6

saliweb

Simple framework for web services in the Sali lab
Python
5
star
7

modloop

Web server for automated modeling of loops in protein structures
Python
5
star
8

allosmod-lib

Protocol to model with allostery
Python
4
star
9

hmc

IMP module for Hamiltonian Monte Carlo
Python
4
star
10

foxs

Web server for fast SAXS profile computation with Debye formula
JavaScript
3
star
11

itcell

Integrative T-cell epitope prediction web service
Python
3
star
12

conda-recipes

Recipes for the conda package manager
Shell
3
star
13

pathway_mapping

Python modules, scripts, and examples for integrative pathway mapping
Jupyter Notebook
3
star
14

npctransport

IMP module for simulating transport through the NPC.
C++
3
star
15

SOAP

Python SOAP framework for calculating statistically optimized atomic potentials
Python
3
star
16

imp-sampcon

Scripts to assess sampling convergence and exhaustiveness
Python
3
star
17

imp_tutorial

Tutorial that demonstrates the modeling of RNA Polymerase II using Electron Microscopy density and chemical crosslinks
Python
3
star
18

PMI_analysis

Python
2
star
19

foxsdock

Web service for macromolecular docking with SAXS profiles
Python
2
star
20

IHMValidation

Validation software for integrative models deposited to PDB
HTML
2
star
21

bayesian_hdx

Support code for HDX data reduction
Python
2
star
22

HMCUtilities.jl

Julia
2
star
23

itcell-lib

Integrative T-cell epitope prediction
Perl
1
star
24

rmf_chimerax

ChimeraX plugin to read and visualize RMF files
Python
1
star
25

zotero

Styles and other files used in the Sali lab with Zotero
1
star
26

allosmod

Web service for simulations on a user-provided energy landscape
Perl
1
star
27

multifoxs

Web server for multi-state modeling with SAXS profiles
HTML
1
star
28

threading

IMP module to sample sequence threading
Python
1
star
29

modbase_utils

Utilities for interacting with the ModBase database
Python
1
star
30

cryptosite-web

Web server for prediction of cryptic binding sites
Python
1
star
31

homebrew-salilab

🍻 Sali Lab formulae for homebrew
Ruby
1
star
32

domino3

Experimental DOMINO variant using traditional inference
C++
1
star
33

imp_biological_systems

A repository for scripts and data for applying IMP to biological systems.
Parrot
1
star
34

asgl

Program for preparing all sorts of PostScript plots from simple data files
Fortran
1
star
35

mist

Mass spectrometry interaction STatistics
Python
1
star
36

mist-web

Mass spectrometry interaction STatistics (web interface)
Python
1
star
37

cross_linking_tutorial

Introduction to working with cross-linking data using IMP
Jupyter Notebook
1
star