ryneches/Atlas

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Created over 11 years ago
Updated almost 10 years ago

ryneches/Atlas

ryneches

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An Arduino library for communicating with Atlas Scientific stamp circuits.

SuchTree

A Python library for fast, thread-safe computations on phylogenetic trees

Jupyter Notebook

Erlenmeyer

A research blogging tool written in Python using Flask.

pique

A efficient peak finder for high coverage ChIP-seq experiments, written in python.

debruijnator

A very simple de Bruijn graph analyzer.

raygun

A simple python wrapper for NCBI BLAST.

GutCheck

Your microbiome, the card game

labrobot

An open source laboratory robot.

Whitney

A tool for spinning fiber and making felts with 3D printers

ryneches

Russell's personal repository

DilutionPlates

(semi)-automated high throughput liquid handling using a 3D printer

kizuchi

A `snakemake` workflow for building gene trees

fishpoo

A study of gut microbial communities of Tanganyikan cichlids

Jupyter Notebook

SummonUndead

A Jupyter magic for raising an undead army of cells on a slurm-managed supercomputer.

PiSlicer

PiSlicer : An print manager for 3D printers, with Flask on the server side and an HTML5 UI.

evo_decal

Some awesome decals representing imporant developments in evolutionary biology.

kollari

A tool for publishing and operating a scholarly journal

catbutt

Investigations into the co-evolution of the felidae and their scent-gland microbes

Jupyter Notebook

platform

Firmware and tools for the envobe sensor platform.

SpaceGrowth

Growth data and analysis for microbial playoffs in space, Project MERCCURI

Jupyter Notebook

tinylab

A liquid handling kit for 3D printers

Davis-UV5R

Station programming for using a Baofeng UV-5R in and around Davis, California

Shand

A pipeline for investigating cospeciation in microbiomes

Jupyter Notebook