Discover ryanneph/SmallSOCC Open Source project

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Created about 7 years ago
Updated over 4 years ago

ryanneph

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SMALL animal irradiation Sparse Orthogonal Collimator Controller - software for precise radiation delivery in small animal tumor studies

ChanVese_Levelset_Segmentation

Reference implementation of Chan-Vese Level Set segmentation for 2D grayscale images

Python

VideoStabilizer

Offline optimization-based video stabilization

TeX

PyMedImage

Medical image handling library for easy manipulation of dicom images in research

Python

Raytrace

General purpose python ray tracing library implemented in on GPU in CUDA as a Cython extension

C++

BNPSeg

Bayesian Non-Parametric Image Segmentation using HDP-MRF

Python

RTTypes

Library for handling common data formats seen in Radiation Therapy

Python

Jai-Code-Interop

Basic examples of code interop between Jai <—> C/C++ <—> nasm (x86-64)

Assembly

geant4-boilerplate

Boilerplate code for performing radiation dose calculation in Geant4

C++

npy2dcm

Simple boilerplate for generating a series of DICOM images from a numpy array

Python

PyViz

Simple python+matplotlib gui viewer for 3d volumetric data in multiple orientations supporting many of the file formats I tend to use in research projects

Python

TF-MultiGPU

Simple example of how to setup multi-GPU (tower-based) model training in TensorFlow 1.x

Python

CT3Dto2D

Utility for converting a CT volume from a single 3D dicom file to the standard set of 2D dicom slice files

Python

GPU-Usage-Logger

Usage logging for Nvidia GPUs

Python

Advent-of-Code

My hand-crafted gourmet solutions to the Advent of Code challenge.

Rust

ryanneph/SmallSOCC

ryanneph

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