ryanneph/BNPSeg

Stars
7
Rank 2,282,330 (Top 46 %)
Language
Python
License
Apache License 2.0
Created almost 7 years ago
Updated over 6 years ago

ryanneph/BNPSeg

ryanneph

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Bayesian Non-Parametric Image Segmentation using HDP-MRF

ChanVese_Levelset_Segmentation

Reference implementation of Chan-Vese Level Set segmentation for 2D grayscale images

VideoStabilizer

Offline optimization-based video stabilization

PyMedImage

Medical image handling library for easy manipulation of dicom images in research

Raytrace

General purpose python ray tracing library implemented in on GPU in CUDA as a Cython extension

RTTypes

Library for handling common data formats seen in Radiation Therapy

Jai-Code-Interop

Basic examples of code interop between Jai <—> C/C++ <—> nasm (x86-64)

geant4-boilerplate

Boilerplate code for performing radiation dose calculation in Geant4

npy2dcm

Simple boilerplate for generating a series of DICOM images from a numpy array

PyViz

Simple python+matplotlib gui viewer for 3d volumetric data in multiple orientations supporting many of the file formats I tend to use in research projects

TF-MultiGPU

Simple example of how to setup multi-GPU (tower-based) model training in TensorFlow 1.x

CT3Dto2D

Utility for converting a CT volume from a single 3D dicom file to the standard set of 2D dicom slice files

GPU-Usage-Logger

Usage logging for Nvidia GPUs

Advent-of-Code

My hand-crafted gourmet solutions to the Advent of Code challenge.

SmallSOCC

SMALL animal irradiation Sparse Orthogonal Collimator Controller - software for precise radiation delivery in small animal tumor studies