rougier/ten-rules

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Ten simple rules for better figures

Supporting material for:

Ten Simple Rules for Better Figures
Nicolas P. Rougier, Michael Droettboom, Philip E. Bourne
PLOS Computational Biology,

http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003833

numpy-100

100 numpy exercises (with solutions)

scientific-visualization-book

An open access book on scientific visualization using python and matplotlib

matplotlib-cheatsheet

Matplotlib 3.1 cheat sheet.

matplotlib-tutorial

Matplotlib tutorial for beginner

nano-emacs

GNU Emacs / N Λ N O - Emacs made simple

from-python-to-numpy

An open-access book on numpy vectorization techniques, Nicolas P. Rougier, 2017

freetype-gl

OpenGL text using one vertex buffer, one texture and FreeType

elegant-emacs

A very minimal but elegant emacs (I think)

CPP-Crash-Course

C++ Crash Course

ML-Recipes

A collection of stand-alone Python machine learning recipes

notebook-mode

GNU Emacs notebook mode

python-opengl

An open access book on Python, OpenGL and Scientific Visualization, Nicolas P. Rougier, 2018

svg-tag-mode

A minor mode for Emacs that replace keywords with nice SVG labels

mu4e-dashboard

A dashboard for mu4e (mu for emacs)

numpy-tutorial

Numpy beginner tutorial

emacs-gtd

Get Things Done with Emacs

nano-theme

GNU Emacs / N Λ N O Theme

svg-lib

Emacs SVG libraries for creatings tags, icons and bars

book-mode

A clean interface for org files (Emacs)

freetype-py

Python binding for the freetype library

matplotlib-3d

Experimental 3D axis for matplotlib

dotemacs

Litterate configuration for GNU Emacs

nano-modeline

GNU Emacs / N Λ N O Modeline

tiny-renderer

A tiny sotfware 3D renderer in 100 lines of Python

org-bib-mode

An Emacs minor mode for literate & annotated bibliography

mu4e-thread-folding

Functions for folding threads in mu4e headers view

agenda

Org agenda in the console

neural-networks

Artificial Neural Networks / Python

nano-sidebar

Emacs package to have configurable sidebars on a per frame basis.

notes-list

Emacs notes list

scipy-crash-course

Material for a 24 hours course on Scientific Python

python-visualization-landscape

Adaptation of Jake VanderPlas graphic about python visualization landscape

org-margin

Outdent headlines in emacs org-mode

calendar-heatmap

Calendar heatmap with matplotlib and random data

emacs-svg-icon

An emacs library to create SVG icons on the fly

sideframe

Emacs side frames

nano-dialog

Emac native dialog box

nano-agenda

A minimal org agenda for Emacs

gl-agg

OpenGL Antigrain Geometry experiments

nano-elfeed

Emacs configuration file for elfeed (news reader)

emacs-splash

An alternative splash screen for GNU Emacs

recursive-voronoi

Recursive voronoi diagram

2021-Dataviz

Material for dataviz course at university of Bordeaux

Jupyter Notebook

CNCC-2020

Computational Neuroscience Crash Course (University of Bordeaux, 2020)

Jupyter Notebook

gallery

Gallery of matplotlib samples

50-git-questions

50 Frequently Asked question about Git & GitHub

mastodon-alt

Emacs alternative mastodon layout

baby-gnu-tux

3D files for printing baby GNU and Tux

windmap

Streamlines animation (matplotlib)

URFIST-git-course

This is the material for the URFIST course on Git & GitHub. Bordeaux, March 27 & 28, 2018.

rougier

Exended profile

nano-vertico

Emacs / nano + vertico

minibuffer-header

Minibuffer header for GNU/Emacs

open-heroes

Some people that facilitate science, one way or the other

alien-life

Remake of necessary disorrder beautiful animation

reviewer-manifesto

A pledge for reviewers

pyglfw

Python bindings for GLFW 3.0

pdf-drop-mode

Get DOI from PDF files dropped onto a Emacs buffer

persid

Persistent identifier library for GNU Emacs

scientific-posters

A collection of scientific posters (with sources) made with Pages or ComicLife

Rich Text Format

nano-toolbar

Emacs toolbar in the header line

org-imenu

org-mode side menu with filtering capability

org-outer-indent

An outer indentation org mode

Neurosciences

Computational Neurosciences repository

nano-calendar

An alternative calendar for Emacs

relative-date

Emacs package for formatting relative dates (dates difference)

CNCC-2019

Computational Neuroscience Crash Course (CNCC 2019)

Jupyter Notebook

unknown-pleasures

Matplotlib animation from the Unknown Pleasures album cover (Joy Division)

2023-dataviz-nancy

Material for dataviz course (Nancy, 2023)

Jupyter Notebook

conference-posters

A collection of conferences posters (with sources) made with Pages

aerial-emacs

A cleaner and less cluttered style for emacs

2024-Dataviz

Material for the dataviz courses, Bordeaux

Jupyter Notebook

VSOM

Randomize Self Organizing map

emacs-octicons

Octicons glyph name for emacs

dynamic-som

Dynamic Self-Organized maps

numpy-glm

GL Mathematics for Numpy

Scipy-Bordeaux-2018

Notes for the Scientific Python course at the university of Bordeaux

Scipy-Bordeaux-2016

Course taught at the University of Bordeaux in the academic year 2015/16 for PhD students.

bootstrap-rst

Restructured Text Bootstrap

nano-bell

Visual bell for GNU Emacs

pendulum

Animated double pendulum using matplotlib

spatial-computation

Spatial computation

nano-splash

N Λ N O Splash

Scipy-Bordeaux-2017

Course taught at the University of Bordeaux in the academic year 2017 for PhD students.

less-is-more

A remake of the animation by Dark Horse Analytics (http://www.darkhorseanalytics.com)

nano-minibuffer

Minibuffer for NΛNO Emacs

org-agenda-conflict

Mark conflicting items in the org-agenda

emacs-defaults

Defaults setting for vanilla emacs

blog

ASPP-2017

Material for the Advanced Scientific Python Programming course, Nikiti, Greece, 2017

nano-command

Emacs / Quick command in the mode-line or header-line

figure-anatomy

Anatomy of a matplotlib figure

Scipy-Bordeaux-2019

Lecture notes (Université de Bordeaux)

gl-bezier

Experiments on quadratic and cubic Bézier curves

mu4e-folding

Thread folding support for mu4e

galaxy

Spiral galaxy simulator using the density wave theory

EmacsConf-2022

Poster for the Emacs conference 2022

mu4e-thread

mu4e thread folding

dana

Distributed (Asynchronous) Numerical Adaptive computing framework

nano-read

Alternartive read functions for GNU Emacs