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RedLionfish
parakeet
Phantom generatorcuda-slic
A CUDA implementation of the SLIC Superpixel algorithmOt2Rec
Pipeline to reconstruct cryo-electron tomograms with different software packagespython-multem
Python wrapper for the MULTEM simulation packageokapi-em
napari plugin to deal with charging artifacts in tomography electron microscopy datarfi-file-monitor
kompressor
A lossless neural compression framework built on top of JAX.napari-quoll
Napari plugin for resolution measurement of EM imagesHDRUK-CoMeTR
Comprehensive Metrics for the quantitative and qualitative evaluation and comparison of Tomography Reconstructionsscivision-parakeet-datasource
antigen-app
Web app for managing nanobody dataLeopardGecko
Software to analyse microscopy volumetric data that has been segmented by ML predictionbaskerville
Baskerville cluster job workflow and utilitiesChamelogator
Data mining the Chameleon databaseempiar-spw
RiboDist
Utility to calculate distance between ribosomes (particles) with lamella edgesphd-training-2022
This repo is a selection of worked example used in our PhD traininghancock
service to work with data catalogue to retrieve presigned URLs of items stored on S3.DisTRaX
A fast and scalable deployment tool to create quick and efficient storage systems onto high-performance computing (HPC) compute nodes utilising the compute nodes system memory/storage.Love Open Source and this site? Check out how you can help us