rosalindfranklininstitute/scivision-parakeet rosalindfranklininstitute/scivision-parakeet

  • Stars
    star
    2
  • Language
    Python
  • License
    BSD 2-Clause "Sim...
  • Created about 2 years ago
  • Updated almost 2 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
rosalindfranklininstitute/scivision-parakeet
github

rosalindfranklininstitute

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Parakeet plugin for scivision framework

More Repositories

1

RedLionfish

Jupyter Notebook
26
star
2

parakeet

Phantom generator
Python
17
star
3

cuda-slic

A CUDA implementation of the SLIC Superpixel algorithm
Jupyter Notebook
17
star
4

Ot2Rec

Pipeline to reconstruct cryo-electron tomograms with different software packages
Python
8
star
5

python-multem

Python wrapper for the MULTEM simulation package
C++
7
star
6

okapi-em

napari plugin to deal with charging artifacts in tomography electron microscopy data
Jupyter Notebook
4
star
7

rfi-file-monitor

Python
3
star
8

kompressor

A lossless neural compression framework built on top of JAX.
Python
3
star
9

napari-quoll

Napari plugin for resolution measurement of EM images
Python
2
star
10

HDRUK-CoMeTR

Comprehensive Metrics for the quantitative and qualitative evaluation and comparison of Tomography Reconstructions
Python
2
star
11

scivision-parakeet-datasource

Python
2
star
12

antigen-app

Web app for managing nanobody data
JavaScript
2
star
13

LeopardGecko

Software to analyse microscopy volumetric data that has been segmented by ML prediction
Jupyter Notebook
2
star
14

baskerville

Baskerville cluster job workflow and utilities
Python
1
star
15

Chamelogator

Data mining the Chameleon database
CSS
1
star
16

empiar-spw

TypeScript
1
star
17

RiboDist

Utility to calculate distance between ribosomes (particles) with lamella edges
Python
1
star
18

phd-training-2022

This repo is a selection of worked example used in our PhD training
Jupyter Notebook
1
star
19

hancock

service to work with data catalogue to retrieve presigned URLs of items stored on S3.
Python
1
star
20

DisTRaX

A fast and scalable deployment tool to create quick and efficient storage systems onto high-performance computing (HPC) compute nodes utilising the compute nodes system memory/storage.
Python
1
star