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ipython-cluster-helper
Tool to easily start up an IPython cluster on different schedulers.tiny-test-data
Super small biological datasets for unit testingbcbio.rnaseq
Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway analysis for bcbio RNA-seq runsjunkdrawer
collection of small scripts or how-tos that don't fall under a separate projectDelicious
Source code to Delicious bookmarking site, pull requests welcomequantum-diceware
Diceware random password generation using the ANU quantum random number server as the randomness sourcebipy
DEPRECATED Lightweight bioinformatics pipeline tools using iPythonspp-idr
Wrappers around NGS peak callers to both call peaks and run IDRQuarkeon-Express
HParty 2011 hackathon projectfusion-gene-blacklist
blacklist of fusion geneschipseq-greylist
Python implementation of the GreyListChIP Bioconductor packagepython-gcon
Python API for interacting with several genomics storage solutions.bcbio-test-data
rna-editing-classifier
Classify A->I RNA editing events from RNA-seq variantsPitchWeather
Links Weather Underground weather data to a PitchFx databasegffutils-utils
Collection of one off type scripts using a gffutils databasemiso-hg38-events
hg38 event level annotations for use with MISO, translated from hg19 from Crossmap.singlecell-barcodes
whitelisted singlecell barcodes and information regarding where molecular/sample/cellular barcodes are in each read, for various singlecell protocolszinbwave-deseq2-indrop
bcbio-nextgen-test-data
Unit test data for bcbio-nextgensalmon-cwl
Example CWL workflow for running Salmonsimple-rnaseq-sim
spliced-blog
data for the -spliced- blogspacemacs-private
private layers for spacemacsbik-manipulation
Training set of manipulated images from open access publications identified by Elisabeth Bikcnvkit
Copy number variant detection from targeted DNA sequencingLove Open Source and this site? Check out how you can help us