• Stars
    star
    417
  • Rank 103,829 (Top 3 %)
  • Language
    R
  • License
    Other
  • Created almost 10 years ago
  • Updated 4 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Sustainable transport planning with R

stplanr

rstudio mirror downloads CRAN_Status_Badge lifecycle R-CMD-check

stplanr is a package for sustainable transport planning with R.

It provides functions for solving common problems in transport planning and modelling, such as how to best get from point A to point B. The overall aim is to provide a reproducible, transparent and accessible toolkit to help people better understand transport systems and inform policy, as outlined in a paper about the package, and the potential for open source software in transport planning in general, published in the R Journal.

The initial work on the project was funded by the Department of Transport (DfT) as part of the development of the Propensity to Cycle Tool (PCT), a web application to explore current travel patterns and cycling potential at zone, desire line, route and route network levels (see www.pct.bike and click on a region to try it out). The basis of the methods underlying the PCT is origin-destination data, which are used to highlight where many short distance trips are being made, and estimate how many could switch to cycling. The results help identify where cycleways are most needed, an important component of sustainable transport planning infrastructure engineering and policy design.

See the package vignette (e.g. via vignette("introducing-stplanr")) or an academic paper on the Propensity to Cycle Tool (PCT) for more information on how it can be used. This README provides some basics.

Much of the work supports research undertaken at the Leeds’ Institute for Transport Studies (ITS) but stplanr should be useful to transport researchers and practitioners needing free, open and reproducible methods for working with geographic data everywhere.

Key functions

Data frames representing flows between origins and destinations must be combined with geo-referenced zones or points to generate meaningful analyses and visualisations of ‘flows’ or origin-destination (OD) data. stplanr facilitates this with od2line(), which takes flow and geographical data as inputs and outputs spatial data. Some example data is provided in the package:

library(stplanr)

Let’s take a look at this data:

od_data_sample[1:3, 1:3] # typical form of flow data
#> # A tibble: 3 x 3
#>   geo_code1 geo_code2   all
#>   <chr>     <chr>     <dbl>
#> 1 E02002361 E02002361   109
#> 2 E02002361 E02002363    38
#> 3 E02002361 E02002367    10
cents_sf[1:3,] # points representing origins and destinations
#>       geo_code  MSOA11NM percent_fem  avslope             geometry
#> 1708 E02002384 Leeds 055    0.458721 2.856563 -1.546463, 53.809517
#> 1712 E02002382 Leeds 053    0.438144 2.284782 -1.511861, 53.811611
#> 1805 E02002393 Leeds 064    0.408759 2.361707 -1.524205, 53.804098

These datasets can be combined as follows:

travel_network <- od2line(flow = od_data_sample, zones = cents_sf)
w <- flow$all / max(flow$all) *10
plot(travel_network, lwd = w)

stplanr has many functions for working with OD data. See the stplanr-od vignette for details.

The package can also allocate flows to the road network, e.g. with CycleStreets.net and the OpenStreetMap Routing Machine (OSRM) API interfaces. These are supported in route_*() functions such as route_cyclestreets and route_osrm():

Routing can be done using a range of back-ends and using lat/lon or desire line inputs with the route() function, as illustrated by the following commands which calculates the route between Fleet Street and Southwark Street over the River Thames on Blackfriars Bridge in London:

library(osrm)
#> Data: (c) OpenStreetMap contributors, ODbL 1.0 - http://www.openstreetmap.org/copyright
#> Routing: OSRM - http://project-osrm.org/
trip <- route(
  from = c(-0.11, 51.514),
  to = c(-0.10, 51.506),
  route_fun = osrmRoute,
  returnclass = "sf"
  )
#> Most common output is sf
mapview::mapview(trip)

You can also use and place names, found using the Google Map API:

trip2 <- route(
  from = "Leeds",
  to = "Bradford",
  route_fun = osrmRoute,
  returnclass = "sf"
  )
#> Most common output is sf
mapview::mapview(trip2)

We can replicate this call multiple times with the l argument in route():

desire_lines <- travel_network[2:6, ]

Next, we’ll calculate the routes:

routes <- route(
  l = desire_lines,
  route_fun = osrmRoute,
  returnclass = "sf"
  )
mapview::mapview(routes) +
  mapview::mapview(desire_lines, color = "red")

For more examples, example("route").

overline() takes a series of route-allocated lines, splits them into unique segments and aggregates the values of overlapping lines. This can represent where there will be most traffic on the transport system, as demonstrated in the following code chunk.

routes$foot <- desire_lines$foot
rnet <- overline(routes, attrib = "foot")
#> 2020-09-03 22:24:08 constructing segments
#> 2020-09-03 22:24:08 building geometry
#> 2020-09-03 22:24:08 simplifying geometry
#> 2020-09-03 22:24:08 aggregating flows
#> 2020-09-03 22:24:08 rejoining segments into linestrings

The resulting route network, with segment totals calculated from overlapping parts for the routes for walking, can be visualised as follows:

plot(rnet["foot"], lwd = rnet$foot)

The above plot represents the number walking trips made (the ‘flow’) along particular segments of a transport network.

Policy applications

The examples shown above, based on tiny demonstration datasets, may not seem particularly revolutionary. At the city scale, however, this type of analysis can be used to inform sustainable transport policies, as described in papers describing the Propensity to Cycle Tool (PCT), and its application to calculate cycling to school potential across England.

Results generated by stplanr are now part of national government policy: the PCT is the recommended tool for local and regional authorities developing strategic cycle network under the Cycling and Walking Infrastructure Strategy (CWIS), which is part of the Infrastructure Act 2015. stplanr is helping dozens of local authorities across the UK to answer the question: where to prioritise investment in cycling? In essence, stplanr was designed to support sustainable transport policies.

There are many other research and policy questions that functions in stplanr, and other open source software libraries and packages, can help answer. At a time of climate, health and social crises, it is important that technology is not only sustainable itself (e.g. as enabled by open source communities and licenses) but that it contributes to a sustainable future.

Installation

To install the stable version, use:

install.packages("stplanr")

The development version can be installed using devtools:

# install.packages("devtools") # if not already installed
devtools::install_github("ropensci/stplanr")
library(stplanr)

stplanr depends on rgdal, which can be tricky to install.

Installing stplanr on Linux and Mac

stplanr depends on sf. Installation instructions for Mac, Ubuntu and other Linux distros can be found here: https://github.com/r-spatial/sf#installing

Functions, help and contributing

The current list of available functions can be seen on the package’s website at docs.ropensci.org/stplanr/, or with the following command:

lsf.str("package:stplanr", all = TRUE)

To get internal help on a specific function, use the standard way.

?od2line

To contribute, report bugs or request features, see the issue tracker.

Further resources / tutorials

Want to learn how to use open source software for reproducible sustainable transport planning work? Now is a great time to learn. Transport planning is a relatively new field of application in R. However, there are already some good resources on the topic, including (any further suggestions: welcome):

Meta

  • Please report issues, feature requests and questions to the github issue tracker
  • License: MIT
  • Get citation information for stplanr in R doing citation(package = 'stplanr')
  • This project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.

rofooter

More Repositories

1

drake

An R-focused pipeline toolkit for reproducibility and high-performance computing
R
1,339
star
2

skimr

A frictionless, pipeable approach to dealing with summary statistics
HTML
1,108
star
3

targets

Function-oriented Make-like declarative workflows for R
R
912
star
4

rtweet

🐦 R client for interacting with Twitter's [stream and REST] APIs
R
785
star
5

tabulizer

Bindings for Tabula PDF Table Extractor Library
R
518
star
6

pdftools

Text Extraction, Rendering and Converting of PDF Documents
C++
489
star
7

magick

Magic, madness, heaven, sin
R
440
star
8

visdat

Preliminary Exploratory Visualisation of Data
R
439
star
9

RSelenium

An R client for Selenium Remote WebDriver
R
332
star
10

rnoaa

R interface to many NOAA data APIs
R
328
star
11

osmdata

R package for downloading OpenStreetMap data
R
315
star
12

charlatan

Create fake data in R
R
291
star
13

software-review

rOpenSci Software Peer Review.
R
279
star
14

iheatmapr

Complex, interactive heatmaps in R
R
259
star
15

taxize

A taxonomic toolbelt for R
R
250
star
16

rrrpkg

Use of an R package to facilitate reproducible research
248
star
17

elastic

R client for the Elasticsearch HTTP API
R
244
star
18

tesseract

Bindings to Tesseract OCR engine for R
R
236
star
19

git2r

R bindings to the libgit2 library
R
216
star
20

qualtRics

Download ⬇️ Qualtrics survey data directly into R!
R
215
star
21

biomartr

Genomic Data Retrieval with R
R
212
star
22

writexl

Portable, light-weight data frame to xlsx exporter for R
C
202
star
23

googleLanguageR

R client for the Google Translation API, Google Cloud Natural Language API and Google Cloud Speech API
HTML
194
star
24

rnaturalearth

An R package to hold and facilitate interaction with natural earth map data 🌍
R
191
star
25

textreuse

Detect text reuse and document similarity
R
188
star
26

piggyback

📦 for using large(r) data files on GitHub
R
182
star
27

tokenizers

Fast, Consistent Tokenization of Natural Language Text
R
179
star
28

rentrez

talk with NCBI entrez using R
R
178
star
29

rcrossref

R client for various CrossRef APIs
R
166
star
30

osmextract

Download and import OpenStreetMap data from Geofabrik and other providers
R
166
star
31

dataspice

🌶️ Create lightweight schema.org descriptions of your datasets
R
159
star
32

rgbif

Interface to the Global Biodiversity Information Facility API
R
155
star
33

tic

Tasks Integrating Continuously: CI-Agnostic Workflow Definitions
R
153
star
34

webchem

Chemical Information from the Web
R
149
star
35

geojsonio

Convert many data formats to & from GeoJSON & TopoJSON
R
148
star
36

tsbox

tsbox: Class-Agnostic Time Series in R
R
148
star
37

MODIStsp

An "R" package for automatic download and preprocessing of MODIS Land Products Time Series
R
147
star
38

ghql

GraphQL R client
R
145
star
39

DataPackageR

An R package to enable reproducible data processing, packaging and sharing.
R
145
star
40

dev_guide

rOpenSci Packages: Development, Maintenance, and Peer Review
R
141
star
41

osfr

R interface to the Open Science Framework (OSF)
R
140
star
42

jqr

R interface to jq
R
139
star
43

tarchetypes

Archetypes for targets and pipelines
R
130
star
44

osmplotr

Data visualisation using OpenStreetMap objects
R
130
star
45

opencv

R bindings for OpenCV
C++
130
star
46

ssh

Native SSH client in R based on libssh
C
126
star
47

RefManageR

R package RefManageR
R
114
star
48

ezknitr

Avoid the typical working directory pain when using 'knitr'
R
112
star
49

spocc

Species occurrence data toolkit for R
R
109
star
50

hunspell

High-Performance Stemmer, Tokenizer, and Spell Checker for R
C++
106
star
51

weathercan

R package for downloading weather data from Environment and Climate Change Canada
R
102
star
52

crul

R6 based http client for R (for developers)
R
102
star
53

UCSCXenaTools

📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
R
102
star
54

gistr

Interact with GitHub gists from R
R
101
star
55

spelling

Tools for Spell Checking in R
R
101
star
56

rfishbase

R interface to the fishbase.org database
R
100
star
57

gutenbergr

Search and download public domain texts from Project Gutenberg
R
99
star
58

git2rdata

An R package for storing and retrieving data.frames in git repositories.
R
99
star
59

openalexR

Getting bibliographic records from OpenAlex
R
98
star
60

bib2df

Parse a BibTeX file to a tibble
R
97
star
61

ckanr

R client for the CKAN API
R
97
star
62

nasapower

API Client for NASA POWER Global Meteorology, Surface Solar Energy and Climatology in R
R
96
star
63

rsvg

SVG renderer for R based on librsvg2
C
95
star
64

EML

Ecological Metadata Language interface for R: synthesis and integration of heterogenous data
R
94
star
65

FedData

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
R
94
star
66

cyphr

:shipit: Humane encryption
R
93
star
67

GSODR

API Client for Global Surface Summary of the Day (GSOD) Weather Data Client in R
R
90
star
68

mapscanner

R package to print maps, draw on them, and scan them back in
R
88
star
69

av

Working with Video in R
C
88
star
70

opencage

🌐 R package for the OpenCage API -- both forward and reverse geocoding 🌐
R
87
star
71

gittargets

Data version control for reproducible analysis pipelines in R with {targets}.
R
85
star
72

tidync

NetCDF exploration and data extraction
R
85
star
73

historydata

Datasets for Historians
R
83
star
74

rzmq

R package for ZMQ
C++
82
star
75

CoordinateCleaner

Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.
HTML
79
star
76

rebird

Wrapper to the eBird API
R
79
star
77

smapr

An R package for acquisition and processing of NASA SMAP data
R
79
star
78

bikedata

🚲 Extract data from public hire bicycle systems
R
79
star
79

dittodb

dittodb: A Test Environment for DB Queries in R
R
78
star
80

arkdb

Archive and unarchive databases as flat text files
R
78
star
81

fingertipsR

R package to interact with Public Health England’s Fingertips data tool
R
78
star
82

vcr

Record HTTP calls and replay them
R
77
star
83

nodbi

Document DBI connector for R
R
76
star
84

opentripplanner

An R package to set up and use OpenTripPlanner (OTP) as a local or remote multimodal trip planner.
R
73
star
85

nlrx

nlrx NetLogo R
R
71
star
86

slopes

Package to calculate slopes of roads, rivers and trajectories
R
70
star
87

tidyhydat

An R package to import Water Survey of Canada hydrometric data and make it tidy
R
70
star
88

rb3

A bunch of downloaders and parsers for data delivered from B3
R
69
star
89

robotstxt

robots.txt file parsing and checking for R
R
68
star
90

codemetar

an R package for generating and working with codemeta
R
66
star
91

tradestatistics

R package to access Open Trade Statistics API
R
65
star
92

unconf17

Website for 2017 rOpenSci Unconf
JavaScript
64
star
93

roadoi

Use Unpaywall with R
R
64
star
94

terrainr

Get DEMs and orthoimagery from the USGS National Map, georeference your images and merge rasters, and visualize with Unity 3D
R
64
star
95

tiler

Generate geographic and non-geographic map tiles from R
R
64
star
96

comtradr

Functions for Interacting with the UN Comtrade API
R
64
star
97

NLMR

📦 R package to simulate neutral landscape models 🏔
R
63
star
98

parzer

Parse geographic coordinates
R
63
star
99

rWBclimate

R interface for the World Bank climate data
R
62
star
100

stats19

R package for working with open road traffic casualty data from Great Britain
R
61
star