Discover rlabduke/suitename Open Source project

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rlabduke

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Categorize each suite in an RNA backbone as belonging to either one of 53 defined types or as outlier

reduce

Reduce - tool for adding and correcting hydrogens in PDB files

C++

116

MolProbity

Protein and nucleic acid validation service

Perl

reference_data

This repository contains reference data from the Richardson Lab at Duke.

Makefile

probe

Evaluate and visualize protein interatomic packing

RNA11

RNA11 dataset PDBs and related files

prekin

Prepare molecular kinemages from protein PDB files

disulfide_research

Tools, scripts, and results for research on disulfide bond geometry

Python

identify_dna_decoys

Code to identify potential purid decoys id DNA, i.e. purines that need to flip from syn to anti or viser versa.

Python

quantitate_density_fit

This tool quantifies density fit.

Python

Protocol-Captures

Archive of lab protocols

TeX

BJH_Dissertation

Python

mage

3d molecular visualization tool

mon_lib

Shell

probe_analysis

Tools for analysis and interpretation of Probe output

Python

lab_scripts

Repository for Q&D lab scripting projects; primarily a repository of scripts not history

Python

PDB_mongodb

This is a repository for a python program that does individual runs on deposited pdbs.

Python

javadev

Java programs (including KiNG) for protein visualization and analysis

Java

rna_precis

Scripts for RNA parameterization. To be folded into cctbx_project when complete.

Python

phenix_king_binaries

This hosts static binaries of KiNG for PHENIX. KiNG code is in the javadev repository.

Python

rlabduke/suitename

rlabduke

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