Discover rlabduke/suitename Open Source project

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rlabduke

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Categorize each suite in an RNA backbone as belonging to either one of 53 defined types or as outlier

reduce

Reduce - tool for adding and correcting hydrogens in PDB files

C++

102

MolProbity

Protein and nucleic acid validation service

Perl

reference_data

This repository contains reference data from the Richardson Lab at Duke.

Makefile

probe

Evaluate and visualize protein interatomic packing

RNA11

RNA11 dataset PDBs and related files

disulfide_research

Tools, scripts, and results for research on disulfide bond geometry

Python

identify_dna_decoys

Code to identify potential purid decoys id DNA, i.e. purines that need to flip from syn to anti or viser versa.

Python

quantitate_density_fit

This tool quantifies density fit.

Python

Protocol-Captures

Archive of lab protocols

TeX

BJH_Dissertation

Python

mage

3d molecular visualization tool

mon_lib

Shell

probe_analysis

Tools for analysis and interpretation of Probe output

Python

prekin

Prepare molecular kinemages from protein PDB files

lab_scripts

Repository for Q&D lab scripting projects; primarily a repository of scripts not history

Python

PDB_mongodb

This is a repository for a python program that does individual runs on deposited pdbs.

Python

javadev

Java programs (including KiNG) for protein visualization and analysis

Java

rna_precis

Scripts for RNA parameterization. To be folded into cctbx_project when complete.

Python

phenix_king_binaries

This hosts static binaries of KiNG for PHENIX. KiNG code is in the javadev repository.

Python

rlabduke/suitename

rlabduke

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