rjpbonnal/bfg-master-2020-course_conda

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rjpbonnal/bfg-master-2020-course_conda

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bioruby-samtools

Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-

bioruby-ngs

This plugins is intended to wrap the common software used for Next Generation Sequencing data

bioruby-gem

BioGem helps Bioinformaticians start developing plugins/modules for BioRuby creating a scaffold and a gem package

ensembl-docker

Ensembl Dockers, APIs, DB

bio-sparql-otf

Run SPARQL queries on biological data converting them in RDF On The Fly

torque_rm

TORQUE Resource Manager for Ruby. Submit, check and control your job directly from Ruby.

bioruby-rdf

BioRuby objects in RDF

bio-docker

Docker containers for bioinformatics, mostly NGS tools

basespace-dojo

bioruby-biolinux

Meta package for BioLinux distribution

bioruby-sradl

Explore or download the he Sequence Read Archive (SRA) with BioRuby

bioruby-blessed

A metapackge for the accepted plugins/module from the BioRuby Developer Team

bioruby-gex

BioRuby and Gene Expression, sef of funcitonalities to analyze gene expression data sets. Cufflinks Quantificaion and Differential Expression, RtPCR, Illumina etc...

testzoho

bioruby-core

BioRuby core plugins

bioruby-foo

TODO: one-line summary of your gem

bioruby-kb-illumina

Gene expression Illumina Annotations, Humans

bioruby-all

BioRuby plugins: ALL

bioruby-full

This version of BioRuby install BioRuby, BioGem and a list of plugins.

bioruby-biogem-pap

Ruby-Generic-Input-STDIN-Files

Easy way to handle inputs on Ruby scripts, dosent matter if you input a single file or multiple files or stdin.

bioruby-core-ext

BioRuby plugins with dependencies to external C libraries or tools

chef-dc-public

Public configuration for a bioinformatics data center