rhshah/iAnnotateSV rhshah/iAnnotateSV

  • Stars
    star
    16
  • Rank 1,311,288 (Top 26 %)
  • Language
    Python
  • License
    Apache License 2.0
  • Created over 9 years ago
  • Updated 3 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
rhshah/iAnnotateSV
github

rhshah

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Generation DNA sequencing data.

More Repositories

1

IMPACT-Pipeline

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
Perl
55
star
2

iCallSV

A Framework to call Structural Variants from NGS based datasets
Python
21
star
3

IMPACT-SV

Detection of Structural Variants Using Delly and Annotation using dRanger
Perl
7
star
4

detect_hotspot_sv

Filtering Delly Raw results for Hotspots
Python
2
star
5

rnaseq-cfu-e-2018

Clustering and differential analysis of CFU-E cells with different conditions
HTML
1
star
6

Exome-Pipeline

This is the Fork of IMPACT-Pipeline modified for exome
Perl
1
star